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Domain assignment for 3218.JGI209618 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3218.JGI209618
Domain Number 1 Region: 29-264
Classification Level Classification E-value
Superfamily SET domain 1.96e-26
Family RuBisCo LSMT catalytic domain 0.0023
Further Details:      
 
Domain Number 2 Region: 256-411
Classification Level Classification E-value
Superfamily RuBisCo LSMT C-terminal, substrate-binding domain 3.53e-16
Family RuBisCo LSMT C-terminal, substrate-binding domain 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI209618
Sequence length 427
Comment (Physcomitrella patens)
Sequence
MEEQGLPKCNVALVEHQLAEGDKGKPIHYVVASQDLQPGDVALTVPKSLVVTLERVLGDE
TIAELLTTNKLSELACLALYLMYEKKQGKESYWYPYIRELDRQRGRGQLSVASPLLWSPE
ELNEYFTGSTMKEVVLERLAGIKREYEELDTVWFMAGSLFKQYPFDLPTEAFSFEIFKQA
FVAVQSCVVHLQGVSLARRFALVPLGPPLLAYKSNCKAMLKAVGDNVQLEVDHAYKTGDP
IAVWCGPQPNSKLLLNYGFVDEDNPFDRLAVEASLNTEDPLYQQKRAVVQKNNRLTIQTF
QIYKGKEMEAVRDMLPYMRLGHLADPEEIETVSFAQEPLCYVSACNERAVLNQIEHFFER
RLAGYKSSDTTKAVDAKKDAKRTVAKKLMSIEKNILRNALAAVHELIRELPDGAISPCIG
PYLPNLK
Download sequence
Identical sequences A9S842
XP_001762568.1.60028 jgi|Phypa1_1|209618|estExt_Genewise1.C_550091 3218.JGI209618

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