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Domain assignment for 3218.JGI70224 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI70224
Domain Number - Region: 304-343
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0288
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI70224
Sequence length 907
Comment (Physcomitrella patens)
Sequence
MENENKNFEGFLGGVSGGDSSKGQGMHMDPSIASMFQAFSLSMQQQQSNDRKEALATKAL
QAVVNKIDQFDGRNISRYLRYYVREMELNRISEKKMVELFGLATIPEIRDHITSITDRYG
NSWEVFSHALKDEYFLEDTDRVTKKLFLEWIERPNKNLQATELLREFERQYSQLSNVEKL
TLEPNKVDVFLQAVDGELQGKLELLLEDKEEDEGLTTKWKNVEDAVGLLTKRERRKDRSN
IPKTVLAPKAPICTTPPTMPTVQPSTSLSKKVDMGIQEIIRRMRDLQIKLARLEENTSTN
NSKNVSKQGYVQRCIWCDDASHTRKDCNEFNNMIRQGIICWKDGKIALKNREDLLQTNFG
KGGMRALVQDYLKEHETAARESASYGARVDDEKLVEVRKLRQTRGDKAREAASQELPVKD
TSTSLGEKTKETKDKGKSIAYKLLSDIEAATNLKGVLEERILNAKVEFTLKEVLRIAKKE
FHDVIIDSIKRKRQLMGEIGMSHPIDARIYRDEKEVDIGYKQPTNEKNGYNQQVRFEDSS
DKEMETLSHYTRMHWTRPTTEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKKQKWLIDM
EHGWAIRAANITRGELYGACSDVRIWIRDVATEQHFFVQDTTSYPLILEQPYITVTWMET
KVLDDGSAYTRRDYGGTKEEVLSRDEDTFDANLIGILENGNITYKKVDDFKRKEKKRLYD
IDEQLCKLGTLQDDERILGVYEENGLEDSLELITSIGLGDNDKIIEIHSREVYTILESLQ
APKVTQETRYKTADKKIKHVAGPLPEDSKEQMREASKEASLRDLMSIGHQFTKETFEELK
IGSDGSLLLEEITCLKKMLAKQGRSFAFKSHEIGCVDPNIITPMVIFTVPHVPWNQRPIP
VSRAHLP
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Identical sequences A9RT60
jgi|Phypa1_1|70224|fgenesh1_pg.scaffold_27000053 XP_001757367.1.60028 3218.JGI70224

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