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Domain assignment for 3218.JGI77018 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI77018
Domain Number - Region: 450-541
Classification Level Classification E-value
Superfamily Acid proteases 0.00169
Family Retroviral protease (retropepsin) 0.04
Further Details:      
 
Domain Number - Region: 218-255
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0288
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI77018
Sequence length 711
Comment (Physcomitrella patens)
Sequence
MELNQVSEKKMVELFGLAMISEIRDHITSITDCYGNSWEVFSHALKDEYFLKDADRFTKK
LFLEWIEQPNKNLQATELLREFERQYSQLSKVEKLTLEPNKVDLFLPADGELQGKLELLL
EDKEKDEGLTTKWKNVEDVVGLLIKRERKKDRSNILKTVQAPKAPVRITPQTMPTVQPST
SLSKKADMGMEEIIRGMRDLQIKLARLEENTSTNNSKNVSKQGYVQRCIWCDDASHTRKD
CNEFNNMIRQGIICWKDGKKALKDREDLLQTNFGWEDPVESLSVHAYIAKCQHETLMEEK
RRGNFDDTREGNSSKRQTGGDKAQEAASQELLVKDTSASLGEKTKETKDKGKSIAYKLLS
DIEAATNLKGVLEEQVLEIAKKEFHDVIIDSIKRKRQLMGETGMSHAIDARIYKDEEVDI
GYKQPTNEKNGYNQDHYTRKHWARATTEVLVKVGDIEEPIVALVDHGSEINLMSKDLYKK
QKWPIDMEHGWAIRVANNTQGKLYGACPDVKIRIEDVATKQHFFVQDTTSYPLILGQPYI
TATWMETKVLDDGSAYARRDYGGTKEEVLSRGEGAFDASFICILENGNIMYKKVDDFKRK
ERKRLYNIEGELRKLGTLQDDERILGIYEENGLEDSLELITSIGLGDNDKIVEIHSREVY
TILESFQAPEVTVETRYKTADKKVKPVAGPLPEDLKKKWEKHQKKQVKEIQ
Download sequence
Identical sequences XP_001763663.1.60028 jgi|Phypa1_1|77018|fgenesh1_pg.scaffold_62000040 3218.JGI77018

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