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Domain assignment for 3218.JGI88611 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  3218.JGI88611
Domain Number - Region: 857-879
Classification Level Classification E-value
Superfamily DNA-binding domain 0.0275
Family Methyl-CpG-binding domain, MBD 0.03
Further Details:      
 
Domain Number - Region: 750-791
Classification Level Classification E-value
Superfamily DNA-binding domain 0.0817
Family Methyl-CpG-binding domain, MBD 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI88611
Sequence length 1363
Comment (Physcomitrella patens)
Sequence
MLTEGEGEGEGDVPLDGVKTAEDFKFYSTQTCSADFQQRSVEVVEFGSRPAKRARLLNDK
SNPAKESQACNSFASRLARDSFIEKKVANVIQMLQTYQADEPMSDSDSGITNELRARIAG
MKVVGCVEASEYDEKKGNMKASAAQDDVKTVFIDSEGVERNAASTMIQQDLGDTASTSSD
EGVFVIKMRSPTSKQLLHGPKLGMDQEELHNCSVAATRIMIGVQDAYDSPGTMGHCHGGG
HDVDDRFIKSLAVEDEERTELDAEKVESSVELANVIPGDAGKKLKICSDIEVQHMQLAAA
DFRDENLDVSKSNQEAEVSPIHRSYSKSTELDEAYEHHSNELFQNDAENVARAEMHTSLG
AGVQNDVAKNLDHCVGLDRERQVVLTRVTDGDIIDVGKLEAVKEDRTLALGSVDSTSDDG
HQVNRYQEGHCNGCEDVTGVERLKSDTATSEIKKTLQNTEFVGDLDDPTILFSPGGPFPI
GNIGGKDGNHINTNDQIDQSKAQVLSPASAGLKDFGKVIQEAPVVGESDSGTGQDLGEDV
SDVVKVYARKRKRSTPTEIVKAESAALKEHSGFSKSEDVSRSQLKDQEPLGERIIKHYSR
RFLCRTDSHRPAAMIEKPNQHMMTSASNGEGSVSLPQAEQHKDISSKSDDARRLQVKDEE
PLGERVIKHYVRRSLGRTDIHGPANMSVKPTQPSMASDCNGEGSIPLPQAEHHTGASAEV
ETEIKINVFRRRSKANPSQQRSPMNGDIDLQCKVTEDHTSEGYVRPDHQPRWLPEGWILE
IRVRDGKKTPVRIRDKCRTSISRHKPCIGLDSSLISCTISKKVAEFFLRRSSMSSNLIEI
YFKVTNYLEFEVNGIIYYFNQKSGHRFRSRNEVLQFLDHERMGRDLMASDALGRKVQSQS
MEGLVSNAPSLVASNPASTQLHTARMKTTPMKPASAVLSQANGTDLPQPREEDRNGSGLL
RCSGAAFSGVRERGRSDSPAKNVVTSALDGVAANSPPPLSSNECARLLSGSSVPAAESPS
DQGNNRGKLIFRLKRKQPDSDTGKGRSKRPMYEVVHGEKASSSTSTPSHQENNLTPGEKT
GQVVTPALDSASTQVERTSAKNPPTSSLSHNFLSDSMLIKTQVENNVPVVDVSFSQPVAE
QPAVMKPVVENATTNQTPQHLDLFLEPYTALGIPATARSSGLQHMASYSANHTHVFLDPL
ENTIPLSWHYYFTSQAPISITTSVPTLGPFPSLFNTSVSGSHSVANTVSIPIFEHFKGVS
SSMQLNAASTLFPCPASGIDSRTRDSSSIVKMTEGVPQTQKATAPKALTKEQNSQLLLGL
GRRLCLAGVEHKKKPCSSHLQTRATTLQDQSQQGFFQAISRMQ
Download sequence
Identical sequences A9T675
jgi|Phypa1_1|88611|fgenesh1_pg.scaffold_172000006 3218.JGI88611 XP_001774107.1.60028

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