SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 321967.LSEI_2591 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  321967.LSEI_2591
Domain Number 1 Region: 18-171
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.5e-42
Family GHMP Kinase, N-terminal domain 0.00014
Further Details:      
 
Domain Number 2 Region: 173-295
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 4.68e-28
Family 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 321967.LSEI_2591
Sequence length 307
Comment (Lactobacillus casei ATCC 334)
Sequence
MIDRQAYGSPETGGWMELIEKAPAKINLSLDALYRHDDGEHEWQMVMTSVDLADYVMISP
HRSIQVSTDSGFLPEDPRNLAYKAALALQRHANIRQGARIHIEKHIPVAAGLGGGSSDAA
AVLRGLNSLWQLGYSRSQLARIGLSVDSDVPYCVYSETALVTGRGDVVTPLGSLPNFWVV
LAKPRVSVSTPTILNAIDYDAGLRHPDTQTVVAGIQNHDFAQMTSGMANSLEAITASRYP
EMSALKQRLQKYGAEFAQMSGSGPTVFGLCQKHSRAMRVYNSMKGFCREVYLLRPFCLSA
TGPRFRG
Download sequence
Identical sequences A0A1Y2KWU8 Q034R0 S2PZ10 S2TUK8
321967.LSEI_2591 gi|116496020|ref|YP_807754.1| gi|301067573|ref|YP_003789596.1| WP_011674938.1.11857 WP_011674938.1.18077 WP_011674938.1.20005 WP_011674938.1.2136 WP_011674938.1.25941 WP_011674938.1.31893 WP_011674938.1.3835 WP_011674938.1.42997 WP_011674938.1.48728 WP_011674938.1.49750 WP_011674938.1.52467 WP_011674938.1.56780 WP_011674938.1.67564 WP_011674938.1.7166 WP_011674938.1.916 WP_011674938.1.91737 WP_011674938.1.99959 YP_807754.1.65993

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]