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Domain assignment for 323098.Nwi_1265 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  323098.Nwi_1265
Domain Number 1 Region: 292-493
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 6.67e-47
Family Multidrug efflux transporter AcrB transmembrane domain 0.000021
Further Details:      
 
Domain Number 2 Region: 819-1015
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 4.32e-43
Family Multidrug efflux transporter AcrB transmembrane domain 0.0001
Further Details:      
 
Domain Number 3 Region: 42-135
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 8.76e-25
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0016
Further Details:      
 
Domain Number 4 Region: 139-184,270-326
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.31e-21
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0058
Further Details:      
 
Domain Number 5 Region: 185-268
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00000000000000301
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0048
Further Details:      
 
Domain Number 6 Region: 558-652
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00000000000000497
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0064
Further Details:      
 
Domain Number 7 Region: 709-791
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0000000000017
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0054
Further Details:      
 
Domain Number 8 Region: 668-706,795-838
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.000000000227
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 323098.Nwi_1265
Sequence length 1044
Comment (Nitrobacter winogradskyi Nb-255)
Sequence
MNDSLSAPFIRYPIGTSLLMAGILFIGLVAFPLLPVAPLPQVDFPTIQVQANLPGASPET
MASSVAQPLERQMAQIPGVAQMTSTSSIGSTSITVQFDLNRNIDGAANDIQRAINAAGGQ
LPKNLPSPPTYRKVNPADSPIMLLSATSDTLPLTTVSDNTDTQLAQQISQISGVGQVIIG
GQQKPSIRIQIDPAKLVAKGLSLEDVRNQISVTTVNSPKGSIDGGTRSYTIYANDQLTLS
KDWGDVIIAYRNGAPLRIRDIGQAVTGPEDNKQAAWANGKRGVFLIIFKQPGANVIDTVD
RIKAELPRLIAAIPPAIKIDLISDRTTTIRAAVEDVQFTLLITVVLVVLVIFLFLRNFWA
TIIPSVTVPLALLGACALMWPFDYSLNNLSLMALTISVGFVVDDAIVVLENISRHVEKGE
EPMAAALKGAREIGFTILSISISLVAVLIPLLLMGGIIGRLFREFAVTLAMAILVSLVVS
LTLTPMMASRFLRRHDSVRHGRLYRLSERGFDAMLDAYRRGLDLVLRWRRTTLLVFFMTL
GLSVYLFVIIPKGFFPQQDNGMILGTSEAAQDISFAEMKKKQEELGRIVLADPAVHSIAM
FIGGGGSALNNGRMYVTLKPLAERDASAQQVIARLRPKLDQVEGARQFLQASQDVRLGGR
ATRTQFEYTLQDADLDELNTWAPKVLKKMQALPELRDVATDQQTGGTTLTLTIDRDAASR
YGISPQLISDTLYDSFGQRQVAQYFTQLNTYRVILEILPELQGRLDTLDRIYLKSPLTGE
QVPLSVFASWTTVPVQPLSISHQGQFPAITISFNLAENASLGDATAAVHNAMRELGAPGT
LNGSFQGTAQAFQQSLGTVPLLILAALVVVYLILGILYESYIHPITILSTLPSAGVGALA
TLMLFGYDFSLIALIGIILLIGIVKKNGIMMVDFAIAAEREEHLPPEESIRKAALLRFRP
IMMTTMAAMLGGVPLMLGTGAGSEIRQPLGYAMVGGLLVSQALTLFTTPVVYLYLDQLSN
WLSGSGRPGDRNLSSHALIKEAAE
Download sequence
Identical sequences Q3ST65
gi|75675457|ref|YP_317878.1| 323098.Nwi_1265 WP_011314554.1.37845

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