SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 326442.PSHAa1702 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  326442.PSHAa1702
Domain Number 1 Region: 18-178,205-253,314-383
Classification Level Classification E-value
Superfamily DNase I-like 2.4e-29
Family DNase I-like 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 326442.PSHAa1702
Sequence length 386
Comment (Pseudoalteromonas haloplanktis TAC125)
Sequence
MFVILKCTAVEPLLIKNTQLKIATFNLFNYLEPPNAYYEFEKIYTAQQWAKKQQWIIDYL
TEHAPDVIGFQEVFSIESLQELVRGQGYEHFAVVDTPEVIDDFIYKRPVVAIAAKYPIVE
VAAVQHDNELVATLGLSADFTFSRKVLRATVTLPHIGNTDCYVVHFKSKRPMIEVDEHNK
ALSPEKNIIEILKANVAGGWGSTIQRGSEATLLMIQMIARREATQQPMILMGDFNNSIAD
GVLSHMLTNTLRFAPAFDAKTYLAKYCLNDAWDLFTKSQLASAESQAPTDDLRVDGHIAS
VVIEQGDANNVAKPATPRTPTHYYGASSSVLDYILLSSEFDASYHDSFFEVSDYNTYDRH
LINPVFERDDLSTDHGVVIVSLTLRS
Download sequence
Identical sequences Q3IH30
326442.PSHAa1702 gi|77360643|ref|YP_340218.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]