SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 331678.Cphamn1_2239 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  331678.Cphamn1_2239
Domain Number 1 Region: 75-237
Classification Level Classification E-value
Superfamily alpha/beta knot 1.44e-42
Family YggJ C-terminal domain-like 0.0006
Further Details:      
 
Domain Number 2 Region: 1-69
Classification Level Classification E-value
Superfamily PUA domain-like 0.00000000000273
Family YggJ N-terminal domain-like 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 331678.Cphamn1_2239
Sequence length 248
Comment (Chlorobium phaeobacteroides BS1)
Sequence
MDLFYTPSDRIDLSGGALTVEGEEFFHITKVLRKKEREVIHITDGMGLSVTAEITKIGRN
GLTAAVTEKKKVLPPSAEVTVALSLLKSSQRFDFFLEKATELGVAGIVPMITERTVSQPK
AEKRARKLERWKKVVVSAALQTKRYHFPEITAPLHFDAVLKREGYDSKLIACETSSIAPD
VSFFGRKVLFLVGGEGGFTGEELEMAVKKGFCEISFGHSILRAETAGIFAVAMARAQIAA
HESPEKWL
Download sequence
Identical sequences B3ENQ5
WP_012475607.1.36401 gi|189501155|ref|YP_001960625.1| 2005308923 331678.Cphamn1_2239

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]