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Domain assignment for 339860.Msp_0980 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  339860.Msp_0980
Domain Number 1 Region: 89-347
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000000000816
Family Galacturonase 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 339860.Msp_0980
Sequence length 1063
Comment (Methanosphaera stadtmanae)
Sequence
MNMKKNIILTTIIIILIISINTTYAQTQENITDTPTTNKITTNTQSNTNNLEHESKIQEN
NEPKTEIKKLKKTLKNNSSDNTTIKNVSSYKELINHINQAKISQTKEYIINMHPGDYNIT
TPILWGEIEGNTKILQINGQNNTINGNNLKKFIKTNINTTLILNNITITNTTDNYGSIIH
NSGNLTINNSILSNSKSTSNTTGGVIFNTGNINIQNTHITNNTAILGILYNHKNNDTSEI
TIRNTYFTNNKATIGGSIYNINTTKLEIIDSNFINNTAYDSIIYIQTEHESLINNTLLSN
NTVYENLITSKATLTINNTKIYNNTQKNMLNTDNTILSYSTIEKNIINTISTNKNNLQLL
HNLISHNNMETIIENYQQLILHNNTITYNNITKKGIYNNGSTYIIENIFKNNIIYDKALI
LSSNINTTVKYSTFYNNKVLDLFIGFENRFIEVNNNKYIKNNLRNTTLNITSIKNPKNPM
NITIDGKIILNPIYNTTVTRGNIDIIYENMTIKTLDIINGSFNTDVILNKTKNNTLLFYY
NGFDDYSPTNTTYNITIEIPVYEIILDTPKNYTYKDTIQYRIKIKNIGYETGYDLIVNNI
LPYNLRLINSSSDYNIINNTWHIPKLKSMENTSIIINSISTNKEDINITINIYNFLNNEN
TTTTKIIKYLEPKYIVDIPEYTNVLLGNIMEYEINITNIGKITGNNITISYILENNNEII
NKRIWTINHLNPGEMKKISYIIIIKNYGTYNGIVNITDSYNTTTHKTFNYSVYRAYISLK
KILSYPGNIINITANIYNLNLELNATIIFKINKVSIRNHEIKIENNSITLLNYKIKDTFQ
RRNYDIEIKYHQKTSNIYLYNTTILTLNKYKVKSYIAPITVKSGKYINITVKLFDENNNK
VYGGRAILKINNKTIRYKNGNIIFLNVNNSTVTLNNYQIPHTFKKKKYTLDLVYSGSSRY
YSNRNSTVLTLIKQKLYVSIKTRTSKNIILKGEKTNKLTYNGNIILKINNKIISNNISPT
KINTTFILPIINNKNITVCYSGNEVYIPYKYTVDYNQYGKNII
Download sequence
Identical sequences Q2NFN5
gi|84489779|ref|YP_448011.1| WP_011406567.1.14142 339860.Msp_0980

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