SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 351160.RCIX1343 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  351160.RCIX1343
Domain Number 1 Region: 33-99
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.0000000863
Family Pre-dockerin domain 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 351160.RCIX1343
Sequence length 298
Comment (uncultured methanogenic archaeon RC-I)
Sequence
MSKAINVTLITALIVVTVWGSIMPHAFAEETSGSVRGCITVNGVPQHGVYVSGFGLFDVT
DEQGRYELPSIPNGSKGTITATFAGYSVESGELTFLNPPYPEVNLNIVMPVVTPTPTPVI
TPTPIITPAPTITPTPTVTPTPTITPTPTATHAPTATPTPTITPTPTPTPTITPSPTATP
VPTDTPVAGYSLPVGTVVWPPADISWAMTRDNAGGNNTLALQDNQSNATTAAEVTDAGLS
GGGSALAQDAGALSWKPNTSSGTAASLPALPVDIPLFALIVACAAYVGFVAYSVIRKG
Download sequence
Identical sequences Q0W4R3
gi|147920274|ref|YP_685956.1| 351160.RCIX1343

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]