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Domain assignment for 35128.JGI23362 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  35128.JGI23362
Domain Number 1 Region: 360-508
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 1.62e-32
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.044
Further Details:      
 
Domain Number 2 Region: 156-232,301-356
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 3.49e-27
Family Poly(A) polymerase, PAP, N-terminal domain 0.05
Further Details:      
 
Domain Number 3 Region: 580-658
Classification Level Classification E-value
Superfamily POZ domain 9.64e-17
Family Tetramerization domain of potassium channels 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 35128.JGI23362
Sequence length 775
Comment (Thalassiosira pseudonana CCMP 1335)
Sequence
MSSDQSDSMGRSDDDEEVPMKAAAKDNNGGGGENKEADSSFLDDDFLSFGGVGSADGDGA
EADDGRGGGGGANYNSGADRRNSGGGNGCKRERSLSLVPTNTIPWLDIAATQQQQQRNTN
NYQQQNSHNDRSRGYGGGTNPNYNTNSNYNNSYSPPLVKLHNEMVSFVKLMEPTKEELEV
RERMVKRVTELAERTFGKGKCEVLPFGSQVTGLCLPNSDIDFVIRFPKKKKDATKIKKGG
SKPDAINLDESEKKTKEKDGGQEEGEDLEDLISNPLHKLAEAVREEFGIRSELDTMDPAV
DDEVDDASEHLSYLEVIEQTRVPLVKFTVAPYNLDIDVCFDQPGGPESAELMHRFMESMP
PLRPLTFILKYFLASRDMNKPYTGGIGSYLLQIMIVSFLQQRSREDLHSKGTAGGKYYNL
GSLLLDFFELYGMDFNYVTTGISVRNDGFYFAKGEREKKSVFWQPNRPFSLAVENPLETT
MDVGAGAFRMNMIQRIFEHAFKTFMAYVAEPREHTDSILATIIPPTEEMVKRMALKVEDS
VEEDVGSKSSANNGDGNNQNNISRKKHKADRRDSGGSRGSGKVFKVTRSLIEKHEGSMLS
RLVSDTWNNDPNEPVFVDRNSDIFAQVLNYLRHGSVVLPATVQKDMFVRDLDFYGIVPEE
GSVKSDSEGWAKQVEARNSRIRELEKESTELELEKNIEAFALYCTTTFLKEGGSGEGVRV
SLYRNSTENEREMHLRYEVAMSVSRDETSKEQFQKSLARHGLNLSDTGGFHIDQL
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Identical sequences B5YMB1
XP_002296060.1.2071 35128.JGI23362 jgi|Thaps3|23362|estExt_fgenesh1_pg.C_chr_70110

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