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Domain assignment for 35128.JGI2991 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  35128.JGI2991
Domain Number 1 Region: 516-617,656-696
Classification Level Classification E-value
Superfamily Ribonuclease H-like 0.00000000000389
Family DnaQ-like 3'-5' exonuclease 0.0059
Further Details:      
 
Domain Number 2 Region: 342-365
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000746
Family CCCH zinc finger 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 35128.JGI2991
Sequence length 758
Comment (Thalassiosira pseudonana CCMP 1335)
Sequence
MTVWNGRNVNILGSSQPSVVDLQKSHPSSNFDEANKPSDVKSVDKSKDATANPVVAAPSS
TAPSAPSAAPVPTKSVWNGRHEKIIVKSDATKPSTNPVPPTATTTTTASSTATIKSDASM
KSFKKKKGDDTNNIVVSSTIPKDEPQSSRQGKEDEGTNSTAGSSTANTLDEDTTTTNTEE
NTVANTTVVVSTSPSNTSSVSTNNSSSSSSSEVAPPTLPSPPVASTKKTKEQQQQTKKSS
PPADVSASAVVGGTNKPKSSSSEEHKKKNNHGGNNKSSSGNANKNGSGGVSSNHKEKKGG
GKGNNYHGNNKGSNKQHKKGSNSENNNGGNGRRRANSDKVDNRQPCSFFAKGMCNRGDAC
TFKHDPSAVTAAPSSSGNNGKGKKNKNNSGAAKAAVPKKSITPHPAVPPLSRFGSGRVFD
PLKARAIQLAKDAQDKEDRSFYASSYDKSIIVKASEEEKKEQVEADDTPFFSIDVECIAT
GYGSCARGINDGCGNERKSGNAPSSQYNDRSCRYPGRVAMVDSDGNVVVDVVIRPPQDGK
GVVSYLTPLTGLTAEMCLGPDSKSLEEAVKALKAALPKNGVLVGQAVDHDIEWLGLTEGK
DFERMVDISVIFRQRMPGILGQASDALRTAEETGELIGVKDADQSSDEYLGFATRYRSFS
LRHVCLNLLSTDIQSGVHDPVIDAKYSLILFHKYRNSSVTKLRIVRDGLHRAPVTPGFAT
EKTPVIDGVCLSAAGYPYKRAARKVWRWYSGLKGKQQS
Download sequence
Identical sequences B8BVX8
XP_002288092.1.2071 jgi|Thaps3|2991|fgenesh1_pg.C_chr_2000946 35128.JGI2991

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