SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 360094.PXO_03228 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  360094.PXO_03228
Domain Number - Region: 41-67
Classification Level Classification E-value
Superfamily Rubredoxin-like 0.0206
Family Rubredoxin 0.028
Further Details:      
 
Domain Number - Region: 57-94
Classification Level Classification E-value
Superfamily Zn-finger domain of Sec23/24 0.034
Family Zn-finger domain of Sec23/24 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 360094.PXO_03228
Sequence length 338
Comment (Xanthomonas oryzae PXO99A)
Sequence
MRADRSMVGPSLHRDQIMAMNRVQFQAGLSLPAFLKRYGNAQQCEQGLEISRWPQGFVCP
RCAATAHSRFQRHGTTYWQCTACYRQTSLRSGTVMDNSKLPLRTWLLGMYLLGQSKTNLS
ALELMRHLGLSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSE
NKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEA
EHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQRSLAETMWRFNR
RFDLTRLVPSLLAAAAASKPWSERALRDVTLFTAESAC
Download sequence
Identical sequences A0A0K0GRK9
360094.PXO_03228 gi|188579190|ref|YP_001916119.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]