SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 360102.YPA_3587 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  360102.YPA_3587
Domain Number 1 Region: 214-324
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.7e-21
Family Pentapeptide repeats 0.0077
Further Details:      
 
Domain Number 2 Region: 401-499
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.7e-19
Family Pentapeptide repeats 0.0035
Further Details:      
 
Domain Number 3 Region: 288-395
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 0.000000000000288
Family Pentapeptide repeats 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 360102.YPA_3587
Sequence length 529
Comment (Yersinia pestis Antiqua)
Sequence
MAPPGQWLKKSAWPDSVPFKLIGFRPDNEEISGAFPAVSARAFVWDNPSAPPSEVTLLRK
TLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQVYKSRSVEGA
ASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQ
KSEEQETLGDLNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTG
CHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSGCLFKQAEWQKAAFTHCKWEKSTFEY
GVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQVIITSCIFEK
CDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFL
KVNLQSSTFINCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFY
NADLRDATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYTVPA
Download sequence
Identical sequences A0A0H2YCZ9
360102.YPA_3587 gi|108809578|ref|YP_653494.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]