SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 363253.LI1161 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  363253.LI1161
Domain Number 1 Region: 10-101
Classification Level Classification E-value
Superfamily SMAD/FHA domain 0.000000000414
Family FHA domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 363253.LI1161
Sequence length 473
Comment (Lawsonia intracellularis PHE MN1-00)
Sequence
MSKVDGIGIYVFSGPHVGAEIILPEGSYTIGTSDSCDIILTDISLAPRHAQLDVHIGESE
NTTHLTVIPLEGGVWSNNQAVPESGFQPKPGDFWYLGNTSFGWNFPGKNWQNKAAQQYAE
TLSQAENDNNNLGLEGGTTQTQEQKDDLVKKVFGDTHPQDVISKIDKFSMGKLIGVCLLI
LFLGAIAISYQRDSVDEKTQVAFLQKVLEDNGFSGVSVIPGAQQIIIRGVVQSDVQRQLI
YTLAQSVHSPVYIDVGVRDDLVNAVKAAFASRGIHISVKEFSDPGIISISGYMKDGFVEE
WSISAMRDDIPIPFKLEKHIVYAKEVAEVLDKIFAENKIGSLKVTYLAGEIEIVGSFDEE
RTKKLDKALAEIKKELDVPIMFKIQQIKPAPITSAQKGQPVKDESDEESSVLGGSVIKGV
TLLPIPFITLSTGERIFKGGVLPSGYTLDSVSLDKLIFSKDNQYKEYPLRGAN
Download sequence
Identical sequences Q1MP62
363253.LI1161 WP_011527239.1.40060 WP_011527239.1.98040 gi|94987603|ref|YP_595536.1| gi|442556451|ref|YP_007366276.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]