SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 3694.estExt_fgenesh4_pm.C_LG_II0046 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  3694.estExt_fgenesh4_pm.C_LG_II0046
Domain Number 1 Region: 319-444
Classification Level Classification E-value
Superfamily POZ domain 4.14e-23
Family BTB/POZ domain 0.0066
Further Details:      
 
Domain Number 2 Region: 192-289
Classification Level Classification E-value
Superfamily POZ domain 0.00000000000000549
Family BTB/POZ domain 0.01
Further Details:      
 
Domain Number 3 Region: 644-800
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000000000000191
Family Galactose-binding domain 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3694.estExt_fgenesh4_pm.C_LG_II0046
Sequence length 801
Comment (Populus trichocarpa)
Sequence
MIEENKFLTVAPFQCAWRKDLKFREAGRGCVAFDAFAHNDVTVVFRENVGSQHYHYKRDN
SPHYTVILGSHRNRRLKIEVDGKTVVDEEGVALCCSSTFQSYWISIYDGLISVGKGRYPF
QNLVFQWLDSNPNCSVRYVGLSCWDKHVGYRNVNVLPLPNNHMLLWKQVDSGEYEGKEEE
LEGEQLSYEKWGLENFLESRELSDVLFIVGKDKRLVPAHKVILQASGNFPLSLPNEDVIQ
LQNISYPILHALLQYIYTGQTQISEAQLGSLRALSLQFELMPLVRQCEETAERFKLNKKL
FDSGKSVELSYPSFQPHCCMAFPSQLPMNVKRLRQLQSTGDYSDINIYIEGHGLVAQLHK
VILSLWSVPFSKMFTNGMSESSSSEVFLSDVSPEAFKVMLEFLYSGVLSLEDSVEFGTLL
LQVLLLADQFGVTHLYQECCKTLLECLSEDSVCPILQAVSSIPSCKLIEETCERKFAMHF
DYCTTASLDFILLDESNFSNIVQHQDLTVTSEERVLNAIIMWGMRARELCGWEEVSELLA
LSTPDLLFKDRLQSLDDFLPFVRFPLMPHDLLKKLGQSNLGRHVPIFHDLVREGISYVEF
ESLRPGNEQNLRFQHRRSSYKELQYISDGDSNGVLYFAGTSYGEHQWINPLLAKRITITA
SSPPSRYTDPKALVSRTYQGTCFAGPRVEGGQIHAWWMIDIGQDHQLMCNHYTLRQDGSR
AFIRCWNLQGSLDGKTWTNLRVHENDQTMCKAGQFASWPITGPQALLPFRFFRVVLTGPT
TDGSNPHNLCICFLELYGYFH
Download sequence
Identical sequences B9GQ11
3694.estExt_fgenesh4_pm.C_LG_II0046 POPTR_0002s01110.1|PACid:18246289 XP_002300643.1.11743

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]