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Domain assignment for 380703.AHA_3299 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  380703.AHA_3299
Domain Number 1 Region: 3-143
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.37e-50
Family Ribonuclease PH domain 1-like 0.0000163
Further Details:      
 
Domain Number 2 Region: 292-487
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 3.09e-47
Family Ribonuclease PH domain 1-like 0.0000157
Further Details:      
 
Domain Number 3 Region: 144-234
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.49e-29
Family Ribonuclease PH domain 2-like 0.0013
Further Details:      
 
Domain Number 4 Region: 449-548
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 6.94e-28
Family Ribonuclease PH domain 2-like 0.0000729
Further Details:      
 
Domain Number 5 Region: 553-639
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.74e-22
Family Eukaryotic type KH-domain (KH-domain type I) 0.0037
Further Details:      
 
Domain Number 6 Region: 619-694
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.51e-21
Family Cold shock DNA-binding domain-like 0.00014
Further Details:      
 
Domain Number 7 Region: 237-319
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 2.51e-17
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 380703.AHA_3299
Sequence length 712
Comment (Aeromonas hydrophila ATCC 7966)
Sequence
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIGAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVFGHEQMQAVINAINEFAADVGTKPWNWTAPAVNEA
LKAKVAELATAELGEAYRITEKAVRYETIGAIKARVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVATGVLPRAHGSALFTRGETQAMVVATLGTERD
AQNIDELTGNRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSADEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTEGVTALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRIAAVD
GDAAKEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADYLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAEPAVAAVEEPAAE
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Identical sequences A0A1C2L3G5 A0A1N6RGT5 A0KND9
380703.AHA_3299 gi|117618225|ref|YP_857790.1| WP_011707071.1.12787 WP_011707071.1.13401 WP_011707071.1.28436 WP_011707071.1.34034 WP_011707071.1.34829 WP_011707071.1.38175 WP_011707071.1.41987 WP_011707071.1.56470 WP_011707071.1.61841 WP_011707071.1.62309 WP_011707071.1.64954 WP_011707071.1.66799 WP_011707071.1.67280 WP_011707071.1.85013 WP_011707071.1.93930 YP_857790.1.44769

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