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Domain assignment for 382245.ASA_1014 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  382245.ASA_1014
Domain Number 1 Region: 3-143
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 3.64e-50
Family Ribonuclease PH domain 1-like 0.0000153
Further Details:      
 
Domain Number 2 Region: 292-487
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.87e-46
Family Ribonuclease PH domain 1-like 0.000017
Further Details:      
 
Domain Number 3 Region: 144-235
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.79e-30
Family Ribonuclease PH domain 2-like 0.0015
Further Details:      
 
Domain Number 4 Region: 449-548
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 7.99e-28
Family Ribonuclease PH domain 2-like 0.0000784
Further Details:      
 
Domain Number 5 Region: 553-639
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 7.21e-22
Family Eukaryotic type KH-domain (KH-domain type I) 0.004
Further Details:      
 
Domain Number 6 Region: 619-693
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.95e-21
Family Cold shock DNA-binding domain-like 0.00014
Further Details:      
 
Domain Number 7 Region: 238-319
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 2.62e-17
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 382245.ASA_1014
Sequence length 713
Comment (Aeromonas salmonicida A449)
Sequence
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PLVSPDIVAMIGASAALAISGIPFGGPIAAARVGYMNGQYVLNPTTAELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVYGHEQMQVVINAINEFAADVGTQPWDWTPPATNEA
LKAKIAELATAELGEAYRITEKAVRYAAIGAIKQRVIEQVIAAGVEDDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVGTGILPRAHGSALFTRGETQAIVVATLGTERD
AQNIDELAGHRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTQGITALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADFLKLGDVVKVKVLEVDRQGRVRLSIKEANAPTEAVAPAADVAAVEEPAAE
Download sequence
Identical sequences A0A1Q4MFZ0 A4SJR9
gi|145298048|ref|YP_001140889.1| WP_011898429.1.10171 WP_011898429.1.13540 WP_011898429.1.1406 WP_011898429.1.2366 WP_011898429.1.23756 WP_011898429.1.28352 WP_011898429.1.29842 WP_011898429.1.36887 WP_011898429.1.40195 WP_011898429.1.41377 WP_011898429.1.44620 WP_011898429.1.46813 WP_011898429.1.49611 WP_011898429.1.51049 WP_011898429.1.51485 WP_011898429.1.52154 WP_011898429.1.53881 WP_011898429.1.57660 WP_011898429.1.5833 WP_011898429.1.62078 WP_011898429.1.75420 WP_011898429.1.79205 WP_011898429.1.86551 WP_011898429.1.8755 WP_011898429.1.91946 WP_011898429.1.93610 382245.ASA_1014

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