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Domain assignment for 388396.VFMJ11_0491 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  388396.VFMJ11_0491
Domain Number 1 Region: 3-145
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.18e-48
Family Ribonuclease PH domain 1-like 0.0000148
Further Details:      
 
Domain Number 2 Region: 291-489
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.01e-46
Family Ribonuclease PH domain 1-like 0.0000197
Further Details:      
 
Domain Number 3 Region: 146-236
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.14e-28
Family Ribonuclease PH domain 2-like 0.00079
Further Details:      
 
Domain Number 4 Region: 451-550
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 4.07e-28
Family Ribonuclease PH domain 2-like 0.0001
Further Details:      
 
Domain Number 5 Region: 555-640
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.48e-21
Family Eukaryotic type KH-domain (KH-domain type I) 0.0049
Further Details:      
 
Domain Number 6 Region: 621-695
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.95e-21
Family Cold shock DNA-binding domain-like 0.0000728
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 388396.VFMJ11_0491
Sequence length 709
Comment (Vibrio fischeri MJ11)
Sequence
MFANPVVKSFQYGNHTVTLETGVIARQATAAVMASMDDTSVFVSVVAKKEAVPGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEAETLTARLIDRPIRPLFPDAFKNEVQVIATVVS
INPEVNPDMITMIGTSAALAIAGIPFNGPIGAARVGHINGELVLNPSNTELENSKLDLVV
SGTEGAVLMVESEADNLTEEEMLSAVVFGHDQQQVVIKAINEFAAEVATPAWDWVAPEEN
TVLNSRIAELAEAKLVEAYQITEKMTRYDRIHEIAAEVNEVLVSENEDVNLKEVHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDSLMGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIQAVMPSIE
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNEGITALQMDIKIEGITKEIMQIALNQAQGARKHILKVMDE
AISGAREDISEFAPRIHTMKISSDKIKDVIGKGGAVIRALCEETGTTIEIEDDGTIKIAA
TEGAAAKEAIRRIEEITAEVEVGKIYTGKVMRIVDFGAFVTVLGPKEGLVHISQIAEERI
EKVADHLQVGQEVKTKVLEIDRQGRIRLSIKEANAELNPAPAAEAKDAE
Download sequence
Identical sequences B5FA83
388396.VFMJ11_0491 gi|197336129|ref|YP_002155245.1| WP_012534174.1.21686 WP_012534174.1.31530 WP_012534174.1.32349 WP_012534174.1.44395 WP_012534174.1.85856 WP_012534174.1.93430

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