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Domain assignment for 390874.Tpet_1172 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  390874.Tpet_1172
Domain Number 1 Region: 488-892
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.89e-155
Family DNA polymerase I 0.00000000286
Further Details:      
 
Domain Number 2 Region: 2-173
Classification Level Classification E-value
Superfamily PIN domain-like 1.46e-47
Family 5' to 3' exonuclease catalytic domain 0.00011
Further Details:      
 
Domain Number 3 Region: 297-483
Classification Level Classification E-value
Superfamily Ribonuclease H-like 7.29e-44
Family DnaQ-like 3'-5' exonuclease 0.0000788
Further Details:      
 
Domain Number 4 Region: 174-288
Classification Level Classification E-value
Superfamily 5' to 3' exonuclease, C-terminal subdomain 6.28e-31
Family 5' to 3' exonuclease, C-terminal subdomain 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 390874.Tpet_1172
Sequence length 893
Comment (Thermotoga petrophila RKU-1)
Sequence
MARLFLFDGTALAYRAYYALDRSLSTSAGIPTNATYGVARMLVRFIKDHIIVGKDYAAVA
FDKRAATFRHKLLETYKAQRPKTPDLLIQQLPYIKRLVEALGMKVLEIEGYEADDIIATL
AVKGLSLFDEIFIVTGDKDMLQLVNEKIKVWRIVKGISDLELYDAQKVKEKYGVEPHQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLEKYRDLEDILNHIHELPQKTRKTMLRDRESAI
LSKKLAILETNVPIEINWEELRYQGHDREKLLSLLKELEFASIMKELQLYEESEPVGYRI
VKDPVEFEKLVEKLKETPSFAIDLETSSLDPFECDIAGISLSFKPKEAYYIPLHHRNAQN
LDEKEVLKKLKEILEDPGAKIVGQNLKFDYKVLMVKGIEPVPPHFDTMIAAYLIEPNEKK
FNLDDLALKFLGYKMTSYQELMSFSSPLFGFSFVDVPLEKAANYSCEDADITYRLYKTLS
LKLHEADLENVFYKIEMPLVSVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEEIYRIA
GEPFNINSPKQVSRILFEKLGIKPRGKTTKTGDYSTRIEVLEELAGEHEIIPLILEYRKI
QKLKSTYIDALPKMVNPKTGRIHASFNQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPNWWIVSADYSQIELRILAHLSGDENLLRAFEEGIDVHTLTASRIFNVKPEEVTEE
MRRAGKMVNFSIIYGVTPYGLSVRLGVPVKEAEKMIVNYFVLYPKVRDYIQRVVSEAKEK
GYVRTLFGRKRDIPQLMARDRNTQAEGERIAINTPIQGTAADIIKLAMIEIDRELKERKM
RSKMIIQVHDELVFEVPNEEKDALVELVKDRMTNVVKLSVPLEVDVTIGKTWS
Download sequence
Identical sequences A5ILW3
WP_011943700.1.89131 390874.Tpet_1172 gi|148270302|ref|YP_001244762.1|

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