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Domain assignment for 39947.LOC_Os08g30010.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  39947.LOC_Os08g30010.1
Domain Number 1 Region: 832-1261
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.45e-179
Family Reverse transcriptase 0.0000105
Further Details:      
 
Domain Number 2 Region: 1433-1592
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.92e-45
Family Retroviral integrase, catalytic domain 0.011
Further Details:      
 
Domain Number 3 Region: 674-779
Classification Level Classification E-value
Superfamily Acid proteases 9.38e-16
Family Retroviral protease (retropepsin) 0.029
Further Details:      
 
Domain Number 4 Region: 618-659
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000000541
Family Retrovirus zinc finger-like domains 0.0037
Further Details:      
 
Domain Number 5 Region: 1704-1784
Classification Level Classification E-value
Superfamily Chromo domain-like 0.0000151
Family Chromo domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os08g30010.1
Sequence length 1802
Comment (Oryza sativa)
Sequence
MAGHPPNHRGEGMIDFVAELARMTLVVGYPDAPEYTTIPPLSGELPHRVRLEVHGYVGTC
LANMAVEASGGTADHACQEAAYLMMARLRERHNYIFHDTAYRYHPSRAHGDGVSSFRPTA
GENDTTFGHMCAVMRGLDRMHSDLHKATKALNDGKLMRIVALKDEVARLKKENAQLKGLP
APGGVRIRTTPRKRTTAPVRIQLAPRNPPPPAAPAAAPAPPAVPAAPAPAPAFTLSFAPA
SAAGGSASGTGGWLSATPSGSGETDPSDSRSRSEGPGCLFGMVYTRTGNRATGEGSNGEE
RADGVHPNGDSGNGPPPLQENPTLAQVMAHQTQMMAAMMQQMQHQHQQMHQRMMQHAEQQ
HQQFGPPPPQSKLPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCNDQEKVAFATH
QLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQKKREFRALHQGNRTVT
EYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLISGDYADFERLVDKAIRQEDQ
RNKMDRKRKAAQFRSNQGSQHRPRFTPGQQGGPTTMIVRQHRPFNSSNFHQGTSGSQNHH
GSQPNRGAAPRPPMAPAQSGQPAQAKKETGAKPGSCFNCGELGHFADKCPKPRRAGPRFI
QARVNHASAEEAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMHGLIREELST
PMRVHTPGNSSTSVQFSPSITIEIQRSPFLANLILLDSKGLDVILGMDWLTKFKGVIDCA
NRTVTLTNEKGETVVYKSLVSPRKGVSLNQIETEIPVDTVEKNSRKLEDIPIVCEYPEVF
PEDLTTMPPKREIEFRIDLAPGTAPIYKRPYRMAANELAEVKKQVDEQLQKGYIRPSTSP
WGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGY
HQLRIREEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDD
ILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNV
ESVTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTAECDKSFE
ELKKKLVSAPVLILPDPTKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTH
DLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIH
YHPGKANVVADALSRKSYCTALCIEGMCEELRQELEHLNVGIVEHGFVAALEARPTLVDQ
VRAAQVNDPEIAELKKNMRVGKARDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQ
YSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWK
WEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAELYLARIMCLHG
VPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALD
FGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGRKCRTPLFWDQTGERQLFGTEVLAEA
EEKVRIIRERLRIAQSRQKSYADNRRRELTFEAGDYVYLRVTPLRGVHRFQTKGKLAPRF
VGPYKILERRGEVAYQLELPSNMIGIHDVFHVSQLKKCLRVPEEQADSEHIDIQEDLTYV
EKPVRILDTSERRTRNKVTRFCRVQWSHHSEEEATWEREDELKAAHPHLFTSSSESRGRD
SV
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Identical sequences LOC_Os08g30010.1|13108.m03097|protein 39947.LOC_Os08g30010.1 LOC_Os08g30010.1|PACid:21888240

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