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Domain assignment for 39947.LOC_Os10g03250.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  39947.LOC_Os10g03250.1
Domain Number 1 Region: 473-902
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.11e-173
Family Reverse transcriptase 0.0000205
Further Details:      
 
Domain Number 2 Region: 1075-1234
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.41e-44
Family Retroviral integrase, catalytic domain 0.013
Further Details:      
 
Domain Number 3 Region: 327-434
Classification Level Classification E-value
Superfamily Acid proteases 0.00000000000000104
Family Retroviral protease (retropepsin) 0.034
Further Details:      
 
Domain Number 4 Region: 266-301
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000000384
Family Retrovirus zinc finger-like domains 0.0032
Further Details:      
 
Domain Number 5 Region: 1346-1425
Classification Level Classification E-value
Superfamily Chromo domain-like 0.000000725
Family Chromo domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os10g03250.1
Sequence length 1443
Comment (Oryza sativa)
Sequence
MVNTRSNGNGPNNPNNNNNGENPTLAQNKLAEFLRVRPPVFSSTTNPVEAGDWLHAIEKK
LDLLQCTDQEKVSFASHQLHGPASEWWDHFRLNRITAEPITWLEFTAAFRKTHIPSGVVS
LKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLGGLNDELSYPLMVGD
YPDFQKLVDKAIRQEDKYNCMEQRKRRIAHFKAQQGSNQKPRLTLGPQSMPQGGSSSVVR
PQRQFFNNNAGNNIRNQAPRPVAAPTQQQPAKREQGSKSVVCFNCGDPGHYADKCPKPRR
VKVVPAQNNSTVPASKARVNHVAAAEAQDAPDVILGTFPVNSVPATVLFDSGATHSFLSM
SFAGNHGMEVEDLRHPLMVSTPSNQALSLQRSPSVRIEIKGVPFLANLILLESKDLDVIL
GMDWLARHKGVIDCANRKVTLTSNDGRVVTVHALSSESLRSRLNQITLEEIPIVREYPDV
FPDDLPGMPPKRDIEFRIDLVPGTTLIHKRPYRMAANELAEVKRQVDDLLQKGYIKPSSS
PWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSG
YHQLRIKEEDIPKTAFTIRYGLFECTVMSFGLTNALAFFMNLMNKVFMEYLDKFVVVFID
DILIYSRTKEEHEEHLRLALEMLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSN
VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF
QELKNRLISAPILILPDPKKGFQVYCDTSKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT
HDLELAAVVHALKIWRHYLFGTRTEMYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGI
HYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFEILNLGIVSRGFVAALEAKPTLID
QVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDT
LYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEW
KWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLH
GVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACAL
DFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILRE
AEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPFRGVHRFHTKGKLAPR
FVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTY
VEKPIRILEINERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESRGR
DSV
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Identical sequences Q8RV09
39947.LOC_Os10g03250.1 LOC_Os10g03250.1|PACid:21884539 LOC_Os10g03250.1|13110.m00234|protein

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