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Domain assignment for 39947.LOC_Os10g24560.1 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  39947.LOC_Os10g24560.1
Domain Number 1 Region: 866-1295
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.03e-176
Family Reverse transcriptase 0.0000175
Further Details:      
 
Domain Number 2 Region: 1473-1593
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.29e-31
Family Retroviral integrase, catalytic domain 0.014
Further Details:      
 
Domain Number 3 Region: 722-826
Classification Level Classification E-value
Superfamily Acid proteases 0.0000000000000411
Family Retroviral protease (retropepsin) 0.024
Further Details:      
 
Domain Number 4 Region: 659-695
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000161
Family Retrovirus zinc finger-like domains 0.0051
Further Details:      
 
Domain Number 5 Region: 359-368,466-471
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.000016
Family Formin homology 2 domain (FH2 domain) 0.06
Further Details:      
 
Domain Number 6 Region: 1705-1784
Classification Level Classification E-value
Superfamily Chromo domain-like 0.0000302
Family Chromo domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os10g24560.1
Sequence length 1802
Comment (Oryza sativa)
Sequence
MEVDEVGGRWTFSRANEGYTSCGPVVEMSWHRAGVLLLGAQSCLPIPGVPAVGGIGSVLL
SMARMGWKLCHVFRLYTVVMAGSVSRRGLDMTGFVLELRGMCVVLGHPHGVDYQARPLPE
QEGDDAEPHAAWEVTAVILAGSPERTSLTVTAGGDSFPAACQSAALLAIGTLHQRYPDEL
QHSPYRYHPRRGGARDYATFRDASSEDDATIVHLARMVEAYDAARIDFHQMVRRGMVENN
MKILELRQENLQLKKDLDAVEAQLHQLKIAQEEVCRPKRRRVCRSQKITARKSTSRPELV
RQSLAWTCFVETPRAEPAPVVPQEGEASGVDGETRRNAATSDGNQPEGSNHNNHGSPPPP
PPPPPPPPPDTNAILTQILAQQANMMTAFLHHLQNPPQHNAPPPPPQHSKLAEFLRIRPP
TFSSSNNPVDALDWLHAVGKKLDTVECSDEEKVIFAAHQLQGPASLWWDHFQATQPEGQP
ITWARFTAAFRRTHVPAGVVALKKREFRELKQGNRSVMEYLHEFNNLARYAPEDVREDEE
KQEKFLAGMDPELSVRLVSGDYLDFQRLVDKSIRLEAKHKELESHKRRLANFRNQQGANQ
RVRYTNPYPGGSSSQQQQQQQQPRSAPRPQFVVRVPQPQQQQSQQGTRAPRPPTPTVQPG
QGRRDASGPQRLCFNCFEPGHFADKCPKPRHQQGQAPPCSNNGGKDVIRGRVNHVTAEDV
LTTPDVIVGTFLIHSIPATILFDSGASHSFISVPFMGRNQLGIERLRNPLLITTPGGVMT
AKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTLYRGPGQ
PVVFFAPPTSVSSSELHQIGLSEIPIVREFGDVFPEELPGMPPKREIEFQIDLAPGTTPL
CKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNE
VTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIRDEDIPKTAFTTRYGLYEFTV
MSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSQSEEDHQHHLGLVLGKLREHQ
LYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQVRSFLGLAGYYR
RFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFKTLKEKLVASPVLILPDTRKDFMVYCD
ASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIY
TDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCNTLNIRG
IPPELNQQMAALNLNIVSRGFLAALEAKPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGF
TEDEHGTLWNGNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYCVSRQSTN
DRPDFSNLSKYQNGKGMKLGWISSPDFQKPKVARFIPVKTTYGGNKLAELYFARIVSLHG
VPKKIVSDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLRACVLD
FGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQVFGTDILRQA
EAKVRTIRDNLKVAQSRQKSYADNHRRDLEFAVDDFVYLRVTPLRAVHSFRTKGKLAPRF
VGPFRIIARRGEVAYQLELPASLGNVHDVFHVSQLKKCLRVPSEQADSEQIEVREDLTYV
ERPVKILDAMERRTRSRVIRFCKVQWSNHAEEEATWEREDELKAAHPDLFASPSESRGRD
SV
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Identical sequences Q338U1
LOC_Os10g24560.1|13110.m02060|protein LOC_Os10g24560.1|PACid:21885549 39947.LOC_Os10g24560.1

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