SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 39947.LOC_Os11g27870.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  39947.LOC_Os11g27870.1
Domain Number - Region: 261-270
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.00445
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os11g27870.1
Sequence length 490
Comment (Oryza sativa)
Sequence
MSSSASPSVAPSAEHAEHLSNLVAIPSLSHEHHYFLGPMTPTLLDITMITGLDVTSSANP
MNFNTKNQFDFRTKRIGGWSGYVAAYMGKGSVTPREHTVFLLTIESSPPRKSNSGKDIEY
APGLIPNGGWLAPPVIGYHAPKTSSLLQGQMREPTDTGRTRKTKASAVDPSALAPKKKSK
KKKTKPTDDLPALDPSIKQALDEEEIKEDVDQAAAELSDLGEKTPSASPKQTPLTPAAPA
HFSRKNKAAVKKKSAAASSKPAPPPPPPPPSHPMQQMSSDRTPSVTGSHNVEEEEQPAAP
AIPVLADLFSFDIKDYFDEEAEEETTSKTLAPLNEDVKKTLEDISLRLESSLDNLVADCG
SIWARFAEIQALVPDDLANAITLAVYLEQHQFKLEKAKQRMADRRERRDIEATIQANWQL
VHEEKAKLDQLSVGPIQSNIDRLEARKIDLIAQLEECYDRAGSREAKVSQSSQCCRRTEI
QTEIDYQECG
Download sequence
Identical sequences Q2R4N4
39947.LOC_Os11g27870.1 LOC_Os11g27870.1|13111.m02675|protein LOC_Os11g27870.1|PACid:21947514

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]