SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 399599.Sbal195_1985 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  399599.Sbal195_1985
Domain Number 1 Region: 30-156,512-603
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000000000000288
Family ABC transporter ATPase domain-like 0.039
Further Details:      
 
Weak hits

Sequence:  399599.Sbal195_1985
Domain Number - Region: 284-320
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 0.0432
Family Rad50 coiled-coil Zn hook 0.019
Further Details:      
 
Domain Number - Region: 441-479
Classification Level Classification E-value
Superfamily PspA lactotransferrin-binding region 0.0706
Family PspA lactotransferrin-binding region 0.008
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 399599.Sbal195_1985
Sequence length 771
Comment (Shewanella baltica OS195)
Sequence
MINGISKIKSLRSFGIYENHINDGCDEFTKYNLIYGWNGSGKSTLSRLFRCIENKSLDGT
NYTESAFEIEYSVDGQAQSVLTQQNLSQNQLNIRTFNNDFVRENIDWSGTVKSILLVDQQ
KIEERKQLDEQIKVLKLKEAASEKEAKRADDLDTEINKFLSRTAKSIKTNLKVIGTEDSK
YLNYNKTSLENLIRSSSAEIVDPASVLTDEQILLHTKSASPVEKDKISFASNTIKQDYFE
SGFVAVTQLLNKSAVNEVIEFLKDNPDVQTWVFSGMSVHDKHKSEECHFCGNMIDESRLT
SLNNHFSNEFKQLKQEITEAIKYCRDLPELSLPVVELFFDEFRPKYKEAVAPLERVTTEI
NSIVEQWRKCIDKKSKDPFDISQKIQSVNIELIEQYNKVIIDIAACIQKHNDKSGDFQTV
TTTHKNALELHYAADEVIDFDYNEKLENRNTANSNVQKLNDEASEIKKEIHRLETELSNE
SIAVDAFNTELAKFIGRTELTLKFDVQQKGYRISRNGSDKNAQNLSEGEKTAIAFVYFAT
KLEEHDNDIKDTIIVIDDPVSSFDSNNLFHSYSFLKKYCEQSKQLFVMTHNFSYFKLVRD
WMLKKNKMRNQPPVIKARAYTIESKFDGMRQSKLVNARGSLTDYNSEYHYLFSKIYSLKN
QQELNLDEVYLCANLSRKLLETFLCFKFPKKRSDFRQLVDDSVRHYPEIKPEDVEKVYRF
INKYSHNQEIELENNVDNLLGESPAILNIILDIVKTIDEAHFTEMEIVATA
Download sequence
Identical sequences A9KZQ4
WP_012196984.1.60405 399599.Sbal195_1985 gi|160875100|ref|YP_001554416.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]