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Domain assignment for 425104.Ssed_1932 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  425104.Ssed_1932
Domain Number 1 Region: 446-688
Classification Level Classification E-value
Superfamily Nucleotide-binding domain 1.18e-55
Family N-terminal domain of adrenodoxin reductase-like 0.00052
Further Details:      
 
Domain Number 2 Region: 353-456
Classification Level Classification E-value
Superfamily alpha-helical ferredoxin 1.78e-17
Family Dihydropyrimidine dehydrogenase, N-terminal domain 0.0037
Further Details:      
 
Domain Number 3 Region: 779-851
Classification Level Classification E-value
Superfamily alpha-helical ferredoxin 0.00000000732
Family Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 0.058
Further Details:      
 
Domain Number 4 Region: 256-310
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 0.000000191
Family Short-chain ferredoxins 0.092
Further Details:      
 
Weak hits

Sequence:  425104.Ssed_1932
Domain Number - Region: 668-755
Classification Level Classification E-value
Superfamily Nucleotide-binding domain 0.000294
Family N-terminal domain of adrenodoxin reductase-like 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 425104.Ssed_1932
Sequence length 895
Comment (Shewanella sediminis HAW-EB3)
Sequence
MVKEKVLDLANKISRTKRGSRNEIKQGDPEYQILEPIVTEPMAEVALCLALRKPLSAQEV
AQQCGKSEEETAKLLWQVAMVGAAFVNEIDGVDKYWIDVWVPGHMEMIVNNKELIQKFPQ
LGAAFDAFGKKKGPLAAGNIPVGSGPMRVIPIQTAIDGETRSASYEEVSKYLNDNSLFSL
SDCACRTSREAMGEGCGHLKEDMCIQMGHAAEYYIRTGRGRKITREDAFEVIRKAEENGL
MHSMPNFDGSGETHAICNCCGCGCFALRLAGMWQNPDMVRSNYVVKIDAEQCVACGECVE
VCPTNALKLGQKLCEISPAKTAKRDLPHDTHWGPDKWNPDYRTNKQVVLDGGTSPCKAEC
PAHIGIQGYIKLAAQGKYREALELIKRENPFPAVCGRICPKKCESDCTRGDIDHPVAIDE
IKKFIAQQDLDAKTRFIPEIKHSHDNKIAIIGSGPAGLSCAYFLAIEGYQVTVFEKQTAL
GGMLTLGIPSYRLEKEVINAEIEVLRALGVTFRCGVEVGKDISLSELRGQEYQAFYLAIG
AQAGRRLGLIGEDAVGVSTGVDFLRKVNLGETDNLDGKVVVIGGGNVAIDVARTATRVGA
STVDLFTLESLDQMPAHVEEVEEALSEEISINNSWGPKRIITHDGKVTGVAFAKCLSVLD
EEGKFAPRFDEQTTTLVEADHVLISVGQAMDWGNLLTDSRLELNPNLTVQADPDTFQTHE
ADIFVGGDVLTGPQFAIDAIAHGKEGAISIHRYVQHGQSLVLGRIKRDYRSFDKDKLNLD
GFDNTPRQALDHVDGKESKQTFRDLRGTFTQEQVQQETERCLGCGVAVADEFMCIGCGAC
TTKCQFDAISLVRAYDADGADLRTVKKVIIKHALKRKVKIAVNAPIKRIKALMTD
Download sequence
Identical sequences A8FUM0
425104.Ssed_1932 gi|157375071|ref|YP_001473671.1| WP_012142278.1.70442

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