SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 480224.Chy400_2240 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  480224.Chy400_2240
Domain Number 1 Region: 42-405
Classification Level Classification E-value
Superfamily NHL repeat 0.0000000000732
Family NHL repeat 0.0097
Further Details:      
 
Domain Number 2 Region: 646-703
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000336
Family Fibronectin type III 0.0037
Further Details:      
 
Weak hits

Sequence:  480224.Chy400_2240
Domain Number - Region: 453-717
Classification Level Classification E-value
Superfamily NHL repeat 0.0523
Family NHL repeat 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 480224.Chy400_2240
Sequence length 735
Comment (Chloroflexus Y 400 fl)
Sequence
MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGN
VYVAGETASTDFPTTPEAYDRSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALT
LDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSRLNGDLTTLLASTFLGGSRES
NGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT
TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKL
NSDLSSLMFSTFLGGRGWESITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNA
FVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVVGATNSSDFPTTSGAYDPSFN
GSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT
SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASA
NFPTTPNASDPSLSGFFNAFVSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVG
STQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDHNAIHPPSSITLQWQSIDNTV
HHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF
SFTVRFAIYLPLTIR
Download sequence
Identical sequences A9WEX4
WP_012257943.1.35445 YP_001635678.1.55443 324602.Caur_2077 480224.Chy400_2240 gi|222525492|ref|YP_002569963.1| gi|163847634|ref|YP_001635678.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]