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Domain assignment for 552536.LMHCC_2890 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  552536.LMHCC_2890
Domain Number 1 Region: 109-268
Classification Level Classification E-value
Superfamily SMI1/KNR4-like 5.1e-26
Family SMI1/KNR4-like 0.0088
Further Details:      
 
Weak hits

Sequence:  552536.LMHCC_2890
Domain Number - Region: 5-87
Classification Level Classification E-value
Superfamily TPR-like 0.0304
Family Tetratricopeptide repeat (TPR) 0.097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 552536.LMHCC_2890
Sequence length 270
Comment (Listeria monocytogenes HCC23)
Sequence
MLTTRKALYYLDKGKTKEAIRLLETCWKQEVTTENKRDIFTATVLLSDVLYQSGERFPEI
YQQLMSILEEMQDLEAVEFEREKAKQIFAELDEYFSEVGTFFQGYSLAELWLEFDYENDY
KDVYPTPQRVAAIEAELGYKLPKSYIYLMRHTQNGGIVSTGSVPTTEPSSWSENCVAITG
IMGIGNQGISALNGMHNTNFWIEEWGYPDVGLAIADCPSAGHDMVFLDYRNCGKTGEPAV
VHIDQEADYKIMKLADNFEAFILSLYREEY
Download sequence
Identical sequences A0A0E0UZL7
gi|386028043|ref|YP_005948819.1| gi|386009423|ref|YP_005927701.1| 552536.LMHCC_2890 WP_012582362.1.33039 WP_012582362.1.53566 WP_012582362.1.5472 WP_012582362.1.81693 WP_012582362.1.83236 WP_012582362.1.90135 WP_012582362.1.95256 WP_012582362.1.98375 gi|217966157|ref|YP_002351835.1|

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