SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 5671.LinJ26.1870 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  5671.LinJ26.1870
Domain Number - Region: 10-62,141-203
Classification Level Classification E-value
Superfamily SNARE-like 0.00806
Family Sedlin (SEDL) 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 5671.LinJ26.1870
Sequence length 317
Comment (Leishmania infantum)
Sequence
MPLETWAVAAVAIVDVEGTPLLLRTYTSPKDVLNSPAAPLHAHLYVGPEDVIKLHFVLFA
SLDRCEDMREMAALPSTGAAAPSSAALVGGGTEASLVSNKSGESSITEVGGVVAGATPAT
ASMANAPAANTARLISPTTDARFLGKLLESHRLRSYGFRSATGIHTLLVTVGSDAPADAM
VPLCRALYECASAALCNPFRSPAQCWRAQEQLLWRAPSSALGGETAGAATSQLAEGAEGK
YESQRFPPCTQGRDAADAARWTSVPSGAMEWSWPRPAPTSAAALTAEPTLALSRTFNTQL
EKLLSSFTVTARSCIVR
Download sequence
Identical sequences A4I2B8 E9BIK1
5671.LinJ26.1870 psu|LinJ26_V3.1900 gi|146090006|ref|XP_001470529.1| XP_001470529.1.40037 XP_003861775.1.44059

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]