SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 579405.Dd703_3428 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  579405.Dd703_3428
Domain Number 1 Region: 87-276
Classification Level Classification E-value
Superfamily Fic-like 7.19e-35
Family Fic-like 0.0091
Further Details:      
 
Weak hits

Sequence:  579405.Dd703_3428
Domain Number - Region: 297-354
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00208
Family Transcription factor MotA, activation domain 0.076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 579405.Dd703_3428
Sequence length 380
Comment (Dickeya dadantii Ech703)
Sequence
MAQFNHFELSLLNPSFDSPLVDALTELELLRHLRLETDVHPILFAQLKAVFHMLESLGSA
RIEGNHTTLADYVESKVEGTQSSTDQLKEINNIEAAMEFIDEHLNNGDEITEYFIRELHS
LAVVGLQQEGDKTPGAYRQHNVSIAQSDHLPPDHIHVPDYMSELTAFINRADKPKYDLMK
IALVHHRFGWIHPFGNGNGRTVRLLTYALLIKYGFNVQVGGRVLNPTAVFCNDRERYYAM
LSLADKGTEQGLEEWCLYVLSGISSELKKVDQLTNHAFLSTKILYPAIDFSSERGLINPL
ESKVLKRAVELGTIKASDLRTALPDLKPAQVTYQLGKLIDRGLLQPVEEGARSYTAKFSN
SYLIRGVIKVLREEGFIPDL
Download sequence
Identical sequences C6C391
WP_015855087.1.30526 gi|242240830|ref|YP_002989011.1| 579405.Dd703_3428

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]