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Domain assignment for 582744.Msip34_2574 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  582744.Msip34_2574
Domain Number 1 Region: 228-425
Classification Level Classification E-value
Superfamily DNA ligase/mRNA capping enzyme, catalytic domain 5.55e-48
Family ATP-dependent DNA ligase catalytic domain 0.0024
Further Details:      
 
Domain Number 2 Region: 428-546
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 6.28e-27
Family DNA ligase/mRNA capping enzyme postcatalytic domain 0.0018
Further Details:      
 
Weak hits

Sequence:  582744.Msip34_2574
Domain Number - Region: 699-746
Classification Level Classification E-value
Superfamily Prim-pol domain 0.0111
Family PriA-like 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 582744.Msip34_2574
Sequence length 870
Comment (Methylovorus SIP3 4)
Sequence
MGLNHYWQKRNFNITPEPSGQVAEAGDTLAFYIQRHHARRLHYDFRLELDGVLKSWAIPK
GPTLDPKEKRLAVHVEDHPLEYGHFEGQIPEHQYGAGKVILWDCGTWEPLEDPHVGYQKG
ALKFMLHGEKLSGKWALVRMGKTPAEGSSEKENWLLIKEKDDVAQSGEQANITENRPESI
RRLFSGDTHRPLKSSDKARRVSVASTLSSRQSAGAHHASPDLDGEVGKTQPMPTTMQPQL
ALLAKKAPVGEHWLTEVKFDGYRMLARCEDGEVKLYSRNGHDWTAKWKGIADALKQLPID
QAWLDGELVALQPNGKISFQALQDAMQANNAATLAYFVFDLMYLNGHDLRSQPLIKRKAL
LKTVLQRAADDSQAPSPLHFSDHIVGNAPEVFDHACLHDLEGIIAKRAESPYQPRRTEDW
LKIKCGLRQEFVIGGYTDPAGSRQGFGALLLGVYDAEGALHYAGRVGTGFTETTLAQVSK
QFSRLQRASSPFTGKLTGLQMRGVHWLTPKLVAEVRFAQWTDSQIVRHAAFVGLRQDKPA
REIVHETPANPPPPTEDAASSPEQSGQQRPQRSGSVREIAGVRLTHPGKILFAQAGLTKQ
DLAHYYEEIAPWILPQLQGRPLSLVRCPTGAGQQCFFQKHAAMTIPDNVRRIQVPVSGFS
DDYMVVDDLPALICLVQMGVLEIHTWGSREENLEQPDRIIFDLDPDEALPWTTVVESAQL
VHALLQALGLESFVKTTGGKGVHVVIPIVPEHSWQTIKAFSKSAAQYLEKQLPDRFTSNM
SKEKRTGKVFIDYLRNAPGATAIAAYSSRAKPSATVSVPISWEELNMGVRSDSFTIANLP
ERLARQKQDPWQDYERLRQHITTAMLEMFT
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Identical sequences C6XB41
582744.Msip34_2574 WP_015831053.1.76919 gi|254000275|ref|YP_003052338.1|

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