SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 5833.PFE0830c-1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  5833.PFE0830c-1
Domain Number 1 Region: 986-1162
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.74e-40
Family G proteins 0.00057
Further Details:      
 
Domain Number 2 Region: 1522-1609
Classification Level Classification E-value
Superfamily Translation proteins 3.34e-23
Family Elongation factors 0.00028
Further Details:      
 
Domain Number 3 Region: 1401-1519
Classification Level Classification E-value
Superfamily Initiation factor IF2/eIF5b, domain 3 2.22e-21
Family Initiation factor IF2/eIF5b, domain 3 0.0034
Further Details:      
 
Domain Number 4 Region: 1168-1251
Classification Level Classification E-value
Superfamily Translation proteins 0.0000000000299
Family Elongation factors 0.015
Further Details:      
 
Domain Number 5 Region: 354-434
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.00000109
Family Cold shock DNA-binding domain-like 0.019
Further Details:      
 
Domain Number 6 Region: 194-283
Classification Level Classification E-value
Superfamily beta-Roll 0.0000131
Family Serralysin-like metalloprotease, C-terminal domain 0.033
Further Details:      
 
Weak hits

Sequence:  5833.PFE0830c-1
Domain Number - Region: 444-482
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 0.0212
Family Cold shock DNA-binding domain-like 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5833.PFE0830c-1
Sequence length 1610
Comment (Plasmodium falciparum)
Sequence
MFLIWRLYKTLFLILYIIILQEYVCHSSNHIKSVNRCFIPFISEYIYKQKNRKNNISYDS
SNSHYNDKIIPCGNYNKQLKYKINFCRNLYFNNKNEYNRICSRNKLNFHNIQTDNTIYKP
KKKYYEVGKVREKIKMYTLFKDDKINTLKCNEEESVTSETINKHDSSVKVKGRRKKNITS
NENIMNPNNKSVSSINTNLSDSSNNKNDNSLNSKKNDNTLNSKKNDNTLNSKKNDNTLNS
KNNNNSLNSKNNNNSLNSKKSNNSYNDKHIDHIIPEGKNKINNNIDVKHNINNKLNEINE
EPYEDTHNKEENSSNKNDNDEKRKEENNNITRRYIKNDQMSYNNINTNSNEYDKNASTLD
ETYIGKTFEGYVYSVNKNAACIKLKNINKYGLLFKNKANLGDDIEDMNDFFEKDQPVHVK
ILGINTKKNIFYLGNIIKYNENIKLSKGEYSKGLITKVCDSYCFIKVLKNGSTGYLHKSK
LFCMNDKEKKNNDNQNYDNPNNDNPNYDNQNYDNQNYNNPNYDHPNYDNQNYDNQNYNNP
NNDYSTSQLYNSDNLQMDFIYKLQFTKIFNIWDIIDVEILGTPQNDYKSNYILTIPRGSK
TFKKILNYLNVLKENEDINNIQYKGDYIYSIDNNKNDNIIDSDINNHHINNKKKKKNLYD
IQNNMNHSPFNKFHTEDEYLFNDHVQENVHTFYEKNKKYKITYDKENNHKMNKSYYLKKN
KELPFNNKFKKIIKNIYDLPNTISLSMLSKTIKIPLASIKKYFIIHENKEYNSSYKINSE
QIKRICQHFKIDCNVEQRDDNVVTKVNGTTKDCQEKVFKNVTQDRLKEGEQERVIKVEAK
IKNDEMVMQEQKDTKEEKHMDVQFIEEKDINVQHINVQDMDVQDMDVQDINVQDMDVQNI
NVQDINIQDMDVQNINNSITLNKSTSCQTDESRDAPGGDQNESLDEKDSMEKSKEKKKKK
GKSRKKNKDTNLTLKSDSIQKSKTTLDDKKRNVVVTFIGHINHGKTSLFDYICKTNEQKK
EYGLITQNIRAFKATVRNNFTFTLVDTPGHEAFMPMRSRGVKISDLSILVISGDEGIQEQ
TVECIKLIKEFNIKIIIAITKVDIPNVDVDRIINDLLYHDITTELNGGEIQVVECSIYKE
ESIDKLLDAIYLESEFLNLQTNPDKKHEQAQGVVLDSYIDKNGIVSINLLQNGVLNINDH
FYTGSSYGKVKILKDHLNKNIKSAYPSDPIKIIGYNKNSVPVAGDKFYVVENEALAKEIA
EHNKNKMLTMEINNFTYDQTNMNRYKDFIISRENKIGGSSGILGENNLKNDIDGNMTRDD
NMTRDDNMTSDDNMTRDGNRTNNDNITSDDNMSNDYDKIKETKMYTNNKSFQKDDFLKIH
LNNTNENVINMDPSTHIGKNEIKTIYSNYIIKCDKQGSIEVLKNCMLKLQKEDSICKIKN
KIIYADIGNVTSSDIKYATSFNATIIAFGVKLSNDIKGSKNSKGSKNHNNYPIIYSNVLY
ELIENVEKEMEKKLSKKPMGELKGTAQILKVFNISKLGKVAGCIVKKGTISINSNIRILR
NDKVIYMGKIISIKIVKEEKTQVTEADECGIGFDNFLDFEPNDIIEAYEN
Download sequence
Identical sequences Q8I3U2
PFE0830c 5833.PFE0830c-1 XP_001351723.1.26446 gi|124506251|ref|XP_001351723.1| gi|23504652|emb|CAD51530.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]