SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 590168.Tnap_0617 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  590168.Tnap_0617
Domain Number 1 Region: 1-180
Classification Level Classification E-value
Superfamily LigT-like 5.06e-47
Family 2'-5' RNA ligase LigT 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 590168.Tnap_0617
Sequence length 187
Comment (Thermotoga naphthophila RKU 10)
Sequence
MRTFIAIDVNEEVKKQASEIIEKLMRRGFGATWVSEENMHLTLFFLGEVDEQKISEIAEH
LCRRVRGFPSFSFTVKGFGYFKRKMSPRVFWLGVENTDRLMKLYEELRNELSHHGFSFEE
KFVPHITIGRVKYYPDKWEKLIEDIDFPPIEVAVDRFKIYSSTLTPTGPIYRVLYECQFE
GGLIRYV
Download sequence
Identical sequences A0A0A6QKJ4 A5IL82 D2C6X7
gi|148270071|ref|YP_001244531.1| 390874.Tpet_0937 590168.Tnap_0617 WP_011943498.1.18251 WP_011943498.1.1950 WP_011943498.1.44660 WP_011943498.1.5118 WP_011943498.1.51822 WP_011943498.1.75526 WP_011943498.1.89131 gi|281412048|ref|YP_003346127.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]