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Domain assignment for 5911.XP_001014870 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5911.XP_001014870
Domain Number 1 Region: 19-166
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000000564
Family Canonical RBD 0.0092
Further Details:      
 
Domain Number 2 Region: 684-761
Classification Level Classification E-value
Superfamily PABC (PABP) domain 0.0000000144
Family PABC (PABP) domain 0.0024
Further Details:      
 
Weak hits

Sequence:  5911.XP_001014870
Domain Number - Region: 367-450
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0981
Family Canonical RBD 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5911.XP_001014870
Sequence length 763
Comment (Tetrahymena thermophila)
Sequence
MSKPEAAFDASKVQTQIGLRIRDLPESCTDELLFAQVFQKLKIDTKKVKAYKVKGHKTFF
NCLGNGIVYFDSEEAAQDAMSKMIGFQLHNKVISCSLMMPTSDLKLKNGKNIYVKNLKST
VTQKQFYDAAHAHGQVLSILLKQNSLGKQDGYATYKSQTSAESAEKNGLKIEETVYSAKI
LKEEDNKNKRGVMNTNSRNIELHFDTPLVCEGFDDADFENQLRAQIVEKFQLHPTSLFVW
GTRARHFSRNSEQTLQDSFNLVNSEVTQACGNPVNGVHACHEKPVGTSCPVLNYFHKKAF
VCFDIKAEAQEFLNKFYANYVSETSQNETDKQLFNFSFKKGDKEVKVATVRCVPETANKE
DKKYKELEERLNPRVLDKSFIFLKNLKKDITVEQIVKSIEDNAQTKVVSVKLSTPTQATF
IRDASKTTDTKFATIQLQDMSKANEFITKFKQEPTIRDKFNDIFENYKYANYLAPKKMHK
QDLKEKNEKSKKQQGNKSSLPPNAFPIPPQFFYNLFNNQMAFPNPKNIMPMFPFPGRQPM
TFPIGGYSNNNNFKNQQNNQNRNTSQPHNTQFNNQQPNRQYNNNFQGNFNKGNTRANTVG
QNRGYNYNNNKLQQNIGGDQKKSFNQRGTATYNHQRQQQPHDKNRNNLQKPTDLPEKKVQ
APKAPAPKAPAPAPKQQLYIPKIEDLVDKTDEQKKQLLGKPLMEKVGQSLPEHQKPLAGK
ITNLLLDFEIYEPEEIISMLSNADELKENIGTALELIQENTAQ
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Identical sequences Q23D16
XP_001014870.1.55412 3824.m03107 5911.XP_001014870

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