SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 6238.CBG16794 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  6238.CBG16794
Domain Number 1 Region: 107-434
Classification Level Classification E-value
Superfamily Nucleotide-diphospho-sugar transferases 1.03e-59
Family Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain 0.00000000898
Further Details:      
 
Domain Number 2 Region: 439-563
Classification Level Classification E-value
Superfamily Ricin B-like lectins 1.23e-24
Family Ricin B-like 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 6238.CBG16794
Sequence length 569
Comment (Caenorhabditis briggsae)
Sequence
MQSLKPIYSIALIGFLLASFTHISISFFFNVKLPENIYFNLLNSVKMDKNTADQLKILMD
TPAFKYSPHGSNGDGVKIPDHLKNLEESRFSENNFNVVASEMISVNRTLPDYRSDACRIS
GGKINTTELPRASIIITFHNEAWTTIIRTLHSISNRSPRHLIEEIVLVDDYSDKYWLKGP
LDIYVRQFEIPVHVTHLPERSGLIRARLTGAKIAKGPILLFLDSHIEVSEGWLEPLISRV
ADDRTRIIAPIIDNISDEDFGFSTGRTDLWGGFSWILSFKWFDMNGNDTQRLIAKKAEPI
RTPTIAGGLFAINREYFYEMGAYDEGMEVWGGENVEISFRIWMCGGSMEIHPCSHVGHVF
RTKTPYSFTKEVNFVIRRNQARTAEVWMDEYKEFFFKMVPSAQKMEIGDLQERKSLRERL
KCKPFKWYLKNVCSECHMPSEYHSLGAIVNKLNGKCVDRGGRVLGGPPGLGTCIHSHEQQ
GNQVWSWTGNKEIRSQNFCLSSNKKGSELKIEMCNGSEDQKFEFNRKIGNIIHQTSGKCM
TNAESVATVDDCKNSRQEQVWDLEASTYK
Download sequence
Identical sequences A8XPT8
CBG16794 6238.CBG16794

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]