SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 64091.VNG1320G from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  64091.VNG1320G
Domain Number 1 Region: 173-233,280-344
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.0000000562
Family TSP type-3 repeat 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 64091.VNG1320G
Sequence length 385
Comment (Halobacterium sp)
Sequence
MFKYTTGSSILVCMSRRRSTAVAAVVVVVAASVAVTAAPAAGRIDTGGGVVTVGVSGPGN
ATVENDTQFIWRNARTDIVATTQDIVFESTSRYDTYRLRLTNDSLSSFQPVFDDAVATTT
VTMREREQRAVSLPVPAGEFETGVHELHVGMYDPETRVEERVNETTITVHAIKRNGDRDG
DGLRNDEEVRAGTALLTRDTDDDGLSDGVEVRVAGTDPTERDTDGDGVDDAAELRAGSLP
EATGSLAERLQGTPASAVDADFDGLPNTAEAELGTSPTERDTDGDGLTDAVEVGVYDSDP
TVADTDGDGLTDGIEVRRFGSDPTAVDTDGDGVNDGREVLDGTDPTQHSALETAHASVIR
PSGPSADAFATQLGRVLFGPPEGNA
Download sequence
Identical sequences Q9HQ55
WP_010902958.1.50382 gi|15790358|ref|NP_280182.1| 64091.VNG1320G

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]