SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 7668.XP_001179546 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  7668.XP_001179546
Domain Number 1 Region: 121-228
Classification Level Classification E-value
Superfamily SRCR-like 1.57e-37
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00011
Further Details:      
 
Domain Number 2 Region: 237-334
Classification Level Classification E-value
Superfamily SRCR-like 2.88e-33
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00012
Further Details:      
 
Domain Number 3 Region: 45-120
Classification Level Classification E-value
Superfamily SRCR-like 4.05e-26
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 7668.XP_001179546
Sequence length 430
Comment (Strongylocentrotus purpuratus)
Sequence
MATSSSVLRKGKLEELRHEILSYKPGKAVPCDDDRVVFPDKLFIDDLQVRLVGGRSDKEG
RVEILYLGTWGTVCDDNWDLNDANVVCRMLGYERAENFSCCAAFGLGPGPIVLDEVECED
DLQVRLVGGRSDKEGRVEILYLGTWGTVCDDNWDLNDANVVCRMLGYERAENFSCCAAFG
LGQGPIVLDEVKCEGTEPNIVHCRRSGYENHDCDHLQDVGVSCIEYEPLRTRVRGGRSGS
LEGTVEVYYQGAYGTVCGDDWDLDDAHVVCHTLGYPRASAYYTNATFREGTGEIILDNVQ
CTGSESNIAFCQHNGYLSHNCEHRQDAGVTCEGIGLIGFLSVAVIGILLGCIFMTLMVRK
YRRSANQASSQQQETAKQNSYNGPQHGEEGCLELNVVPPKLPERSSRDQGELYETPRHAD
DGDVYEDIKI
Download sequence
Identical sequences 7668.XP_001179546

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]