SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 7739.JGI69148 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  7739.JGI69148
Domain Number 1 Region: 465-596
Classification Level Classification E-value
Superfamily TNF-like 9.23e-26
Family TNF-like 0.00085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 7739.JGI69148
Sequence length 597
Comment (Branchiostoma floridae)
Sequence
MAGLAGLMMVKLVTMAYLLVNRGCAVMSASQVDEQGTCSKPCTNITVVASPGQKGDMGLR
DFKDEKYCHSESGDGEPGAQGPLGVKGKKGDRGSMGLVGPIGIPGAQGNPGDVGASGEKG
ERGLKGIYGPPGRKGDTGDPGDPGVRGFPGVKGPPGEKGSPGWLGLPGRPGKKGGKGDPG
RRGANGQAGVPGPPGVGSPGRKGEKGEPGRTSAAGASSLVIPGPPGSIGLPGEKGDKGTP
GRTGAVGLPGIPGRPGEGVTGKKGAKGDEGKIGATGVPGEKGEKGVEGRTGPPGLPGQDG
VAGEKGEKGEPAEVRTTRVRGVPGEDGLPGEKGQKGDPGRPGPPGESTYTTVSGASYALQ
GPPGSRGVPGDKGEKGDRGFPGDRGFEGGQGTPGYPGSPGPEGMPGMKGPKGDPGKPGKT
GTPGEYGQPGGQGRTGFKGDKGEPGKSCNCGGGVLGAHGRLADLPFVAFSAALANRILNA
LENTIVTYNIVHTNVGRAYDMTTGKFAPSIRGYYVLAFSGMTTSVKDSAYWSRLMLNGEP
VISLYDKSLGEHLSSSNSAILLLKPGDEVWVELDARSSMWGDYTGYVTFSGYLIHHV
Download sequence
Identical sequences 7739.JGI69148

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]