SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 7739.JGI88843 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  7739.JGI88843
Domain Number 1 Region: 50-267
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 3.8e-19
Family Calponin-homology domain, CH-domain 0.00079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 7739.JGI88843
Sequence length 879
Comment (Branchiostoma floridae)
Sequence
MQIHDGDPQQLQRPRCCQGDIVSSSYHGNIILQLHPPGKDTMATICHYGNNILLVYQGWA
NSVLCEGGYLIEDLTELQNGALLCCLVDILTGSNLTPTSQISSPTASLENVEKVLSHLRQ
HGIKLSVTARGVVCGELKSLLDVVWALILHYTVHSKDCNPFQRTVRVGKRLLLQWCSSQL
PDLPININGSMAYNYSKHAVLTQLIGKYCCMPHLASPGKSTDVMTLTNAVLAAEEKFGVS
KLIVSPSEILNGTADDHALMIYTALLRRKVCLVLRASEVVCSRKALVCGDYKSSKSVIVS
CWEVCLAGKGHFLTQSFIRSVCAKISLLQEDPSVLAQAGRILLADAPKLLPTAQPQRKSH
PTGVQKAASPPKRPGAPAGTAEVTGEFQTGGPTELQSGRSLSDDLGLTQRSPTQGHSRQA
TRSSQGQHEGAKERSASDVSSRSTVSGSSQYSSVSGVSKLTGSTDAQTAVLNTGKAADPS
MLSSQRKPSPQKSLAEEIRESLTPGGAVDSGQTSGASDTYLTRDLLKTFNQGLAQSRAKP
LTVQTGSVDQVRAGNALDSPSSVSDKRTSDSGMLSREGTMGTMTPQSSTSELSVKSQREW
TPTNGKAGSHDEDLTFSADEFGRKLEAALKATPLNTTFNLHDESSYDHTQDRQKSSSLTN
IRVKSLPNGDSGFSSSTALCKNGPSSSSDGNLYLNPDSGYPFQNRPKLGNFANISGVLNS
SLLSEGVIFRAEDLQDPELTKLPDFSLSSPTPGSPSNPRMQSTPVPTRMPSPMSLLSFMT
SMEQGGGDELLSLLEMIGQQSEKLRTELEEAQTLFSWFKLFWTVHVREAQLLDEIEELQA
QQVSQPQEEAVDSRVLAKLSQMGDTIWLCMPGPVFQSQG
Download sequence
Identical sequences 7739.JGI88843

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]