SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 8090.ENSORLP00000003669 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  8090.ENSORLP00000003669
Domain Number 1 Region: 127-255
Classification Level Classification E-value
Superfamily DNA clamp 5.65e-47
Family DNA polymerase processivity factor 0.000000513
Further Details:      
 
Domain Number 2 Region: 1-126
Classification Level Classification E-value
Superfamily DNA clamp 2.29e-42
Family DNA polymerase processivity factor 0.000000848
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 8090.ENSORLP00000003669
Sequence length 260
Comment (Oryzias latipes)
Sequence
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDAADTLALVFETINQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEEEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHIKYYLAPKIDEEAS
Download sequence
Identical sequences H2LCM9
XP_004072235.1.28442 8090.ENSORLP00000003669 ENSORLP00000003669 ENSORLP00000003669

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]