SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 81824.JGI11875 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  81824.JGI11875
Domain Number - Region: 200-462
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 0.0994
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 81824.JGI11875
Sequence length 496
Comment (Monosiga brevicollis)
Sequence
MTVNLMSRIKDDEDEIGQDDAVEGSEHQRRHTYMEEYNLADDHDVFWDSYGSINRYTPLK
ERLSAYSFRTLDNEGEPWKRNNEEELDHARRQSDVAGYISEPMGRHVSQHDHRGLAAMDG
DEDWKRVSRDGTSMVPLGLDESGPMGRHVSQHDHRGLAAMDGDEDWKRVSRDGTSMVPLG
LDESGPMGRHVSQHDHRGLAAMDGDEDWKRVSRDGTSMVPLGLDESGPMGRHVSHHDHRG
LETLDNDADWKRVGRGETAMVPLSVDATASGGHVSHHDHRGLETLDNDADWKRVGRGETA
MVPLSVDATASGGRHVSHHDHRGLETLDNDADWKRVGRGETAMVPLSVDATASGGHVSHH
DHRGLETLDNDADWKRVGRGETAMVPLSVDATASGGHVSHHDHRGLETLDNDANWKRVGR
GETAMVPLSVDATASGGHVSHHDHRGLETLDNDADWKRVGRGETAMVPLSVDATASGGHV
SHHDHRGLETLDNDAD
Download sequence
Identical sequences A9VAJ7
jgi|Monbr1|11875|fgenesh1_pg.scaffold_32000106 81824.JGI11875 XP_001749688.1.20067

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]