SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 9031.ENSGALP00000033266 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  9031.ENSGALP00000033266
Domain Number 1 Region: 1125-1296
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 5.18e-47
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.01
Further Details:      
 
Domain Number 2 Region: 417-478,516-611
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 1.11e-36
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.092
Further Details:      
 
Domain Number 3 Region: 977-1121
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 9.27e-35
Family Poly(A) polymerase, PAP, N-terminal domain 0.073
Further Details:      
 
Domain Number 4 Region: 263-450
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 5.18e-23
Family Catalytic subunit of bi-partite nucleotidyltransferase 0.045
Further Details:      
 
Domain Number 5 Region: 1426-1452
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000959
Family Retrovirus zinc finger-like domains 0.0037
Further Details:      
 
Domain Number 6 Region: 1322-1350
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000000994
Family Retrovirus zinc finger-like domains 0.0052
Further Details:      
 
Domain Number 7 Region: 940-965
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000174
Family Retrovirus zinc finger-like domains 0.0045
Further Details:      
 
Weak hits

Sequence:  9031.ENSGALP00000033266
Domain Number - Region: 228-264
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00164
Family Classic zinc finger, C2H2 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 9031.ENSGALP00000033266
Sequence length 1477
Comment (Gallus gallus)
Sequence
KPYFTKQSKEPEMLFEEEFKGGLLRKDYQVMDEYGNGHSNKIDINLQKKKGAPGHYGGSP
RRGPRSVFSSPNSLKNITHSQGSKLSDTQKDQIKKWISDDHRGNSDSWRDYRSGIWIPTH
NRARKDSFHEVEGAGNRNVRRQLQKDLADEDMSDMQRGSSEMKKLRKTRRSRKSRKDEYD
QDDEVDGPVIDESVLSAKELLGLQQAEERLKRDFIYRLKKQPRSYPSAKYACKLCDVLIE
SVTFAHKHIKEKRHKKSIKEKQEEQLLSALPPPTPSQIKAIDVAIENVVQEFGLSNADLQ
ERLKIRTIMEDLLHQKLPECSLRLYGSSLSGFGFKTSDINIDIQFPASMSQPDVLLLVQE
SLQNSESFIGVDADFHTRIPVVVCREKQSGLICKVSAGNENAYLTTNHLATIGKLEPTVT
SLVIAFRYWAKLCCVDRPEEGGLSPYVFALMVIFFLQQRKEPFLPVYLGSWIEGFSLNKL
TNFHLKEVENDVVVWEHNPVDNADLPQEISPKRDKVPLVFDSVQKCSAPVGQLWVELLRF
YALEFNMADLVISIRLKEIVSRELKDWPKKRIAVEDPYSVKRNVARTLNSQLMYEYILHC
LRATYKYFALPHKKPVKLSKKSLPNTNEEKPLKLDSGNDTVKPENSELQNVSGSVNTAVV
EDCVIETTDIPQVHGTFPSKVCDGSESVTEEELADDTSHLGIAQEDSDCIVEEVISGDNE
GFKPSCEEMESGNEEEEEEEQEQEGIDEDSDGADLPVTMTDRDIETCSTSDLEGFQNTAL
IESDEFGLECMGIMDNKIDVDEESTEGTDELDESPQKFMHSTKNQLPVVINSEEEEEEEQ
LSLLNQAACGGILTAKGELDSTYPGSGDENALSEEDDDLSITNKYEENHFKDNMHGSLKL
NFSQEDLTEKGNLYEENTVIEKCLESELFYEFSKQAFTKGKSPTVVCSLCKREGHLKRDC
PEDFKKIELDPLPPLTPKFSVILDQVCVQCYQDFAPNNVEDQAREHIRQNLENFIRLEFP
GTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELGRFINLMSKSLRNVL
PITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAIDPRVKYLCYTMKVFTKM
CDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKEPKKPEILVDGWNVYFFDKI
EELPAVWPDSGKNTESVGQLWLGLLRFYTEEFDFKEHVICIRRKNLLTTFKKQWTSKYIV
IEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGTPVKIFPKEYPSKMEYFFDPEVLTE
GELAPNDRCCRICGKIGHFMKDCPMRRKLRRRRDYEDSKNQRYTENKEKSKEDKEIQNRT
TEKESAVKEGKLHVFTPQKNKVARGVVETGKEKSPRQSTEKRKRLEDRELKEKRCFICGR
EGHIKKECPQYKVAAGMKLIKLSSLSRTYRKITDKNE
Download sequence
Identical sequences ENSGALP00000020554 9031.ENSGALP00000033266

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]