SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 9258.ENSOANP00000024766 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  9258.ENSOANP00000024766
Domain Number 1 Region: 31-249
Classification Level Classification E-value
Superfamily beta and beta-prime subunits of DNA dependent RNA-polymerase 5.95e-62
Family RNA-polymerase beta-prime 0.0000285
Further Details:      
 
Weak hits

Sequence:  9258.ENSOANP00000024766
Domain Number - Region: 272-333
Classification Level Classification E-value
Superfamily HMG-box 0.0539
Family HMG-box 0.0063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 9258.ENSOANP00000024766
Sequence length 386
Comment (Ornithorhynchus anatinus)
Sequence
GVEDIKPQADIKRHAVIEESTLCGPRAVRAAFNLPETASQEEVQGRWQDAHLSQDQQYFN
MVDLKFKEEVNHYSNEINKACMPFGLHRQFENNQMMVQSGAKGSTVNTMQISCLLGQIEL
EGRRPPLMPSGKLPCFQPYDVTPRSGGFVTGRFLTGIKPPEFFHCMAGREGLVDTAVKTS
RSGYLQRCIIKHEGLVVQYDLTVRDSDGSVIQFLYGEDGLDIPKTQFLQSKQFPFLANNY
EVIKKSKHLDEVLSKMPQQAHQHFRALRRWQSKHVASPPREGAFLNFSQKIQAAVKALNL
SGSSKNGRNPTAQEILKMWYELDEKSQKKYQKRVVPCPDPCLAVWRPDIYFASVSETFED
EVDAYAREWAAENENGFLNTGLSPER
Download sequence
Identical sequences F7EFA0
ENSOANP00000024766 9258.ENSOANP00000024766 ENSOANP00000024766

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]