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  Home > Genomes > STRING v9.0.5 > 135651.CBN13559

Domain assignment for 135651.CBN13559 from STRING v9.0.5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  135651.CBN13559
Domain Number 1 Region: 739-917
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 5.07e-19
Family Laminin G-like module 0.019
Further Details:      
 
Domain Number 2 Region: 532-713
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.98e-18
Family Laminin G-like module 0.013
Further Details:      
 
Domain Number 3 Region: 1477-1519
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000153
Family EGF-type module 0.0063
Further Details:      
 
Domain Number 4 Region: 406-442
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000252
Family EGF-type module 0.011
Further Details:      
 
Domain Number 5 Region: 966-1140
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.00000000339
Family Laminin G-like module 0.038
Further Details:      
 
Domain Number 6 Region: 159-200
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000105
Family EGF-type module 0.0066
Further Details:      
 
Domain Number 7 Region: 1176-1217
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000634
Family EGF-type module 0.0095
Further Details:      
 
Domain Number 8 Region: 126-167
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000267
Family EGF-type module 0.012
Further Details:      
 
Domain Number 9 Region: 1550-1589
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000392
Family EGF-type module 0.011
Further Details:      
 
Domain Number 10 Region: 203-240
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000477
Family EGF-type module 0.021
Further Details:      
 
Domain Number 11 Region: 21-56
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000574
Family EGF-type module 0.01
Further Details:      
 
Domain Number 12 Region: 1363-1400
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000224
Family EGF-type module 0.038
Further Details:      
 
Domain Number 13 Region: 286-321
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000251
Family EGF-type module 0.024
Further Details:      
 
Domain Number 14 Region: 1208-1250
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000261
Family EGF-type module 0.022
Further Details:      
 
Domain Number 15 Region: 1287-1323
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000348
Family EGF-type module 0.013
Further Details:      
 
Domain Number 16 Region: 1402-1439
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000375
Family EGF-type module 0.015
Further Details:      
 
Domain Number 17 Region: 1514-1558
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000536
Family EGF-type module 0.006
Further Details:      
 
Domain Number 18 Region: 1242-1284
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000541
Family EGF-type module 0.041
Further Details:      
 
Domain Number 19 Region: 365-404
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000594
Family EGF-type module 0.021
Further Details:      
 
Domain Number 20 Region: 329-360
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000672
Family EGF-type module 0.01
Further Details:      
 
Domain Number 21 Region: 1324-1363
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000123
Family EGF-type module 0.011
Further Details:      
 
Weak hits

Sequence:  135651.CBN13559
Domain Number - Region: 1441-1475
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000105
Family EGF-type module 0.051
Further Details:      
 
Domain Number - Region: 473-510
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000205
Family EGF-type module 0.037
Further Details:      
 
Domain Number - Region: 1607-1651
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000585
Family EGF-type module 0.025
Further Details:      
 
Domain Number - Region: 55-92
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00454
Family EGF-type module 0.024
Further Details:      
 
Domain Number - Region: 950-998
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0218
Family EGF-type module 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 135651.CBN13559
Sequence length 1717
Comment (Caenorhabditis brenneri)
Sequence 
MKYQHFLIVCTLVTNALCDRACSRNTCLNGGTCTVNDETRMFQCECPQGFSGLLCQDNCS
LHCLHGNCLKGTFGEETCQCSEGWMGSLCDILVTDAQKCTPQCDDEERCTKGADGSYFCQ
NTTSPVSSCTTHTCENNGTCVTENGNAKCSCVNGFVGEHCETDVDQCRESFCQNGASCEN
LIGGYNCICLKGYSGKYCEVQDKKNCTANYCQNDGVCNSNSIELTCECPDGFEGDFCETK
SKANDPLIGCTCENPAHVCSLVNGTTQCECPSGFMGSDCKELKARPCDLEPCLNGGHCVD
DGQNLFTCFCLPHWTGVYCGEPVECLVNGSDCKNGGKCVFSLTSTSCECLEGFTGANCEV
SNSYRSHPTCSDIRCQNGGVCKIDAEGEPYCDCPEGYEGPFCEPKSGCTINPCQNGGTCQ
DADGQYFCHCKNGFAGVHCETLEEPSTPIPTLGNFPVLTTSGVDQLSQNEITCEDCVNSS
NCLDTESGLVCVCRSGFFGQKCDQKHNKCAKVVCPAGQTCNQISENNNITAQCGCDIGHF
GQKCEMVTSATFTAKSLYIHQSSKFSLGTSSFENMAYELEFTFRTTVENTHLASSEDILG
EKILTIQLVSGYLVFNVTGNFMTHLLPMKINDAHWYTVSVKGENDNIEVVVLDENSFKLV
QKSLTGQLEVFLTRFGKISGSHHFIGCMADVRVDGELIIFPESKRAIEIRKGCTRSEQCS
RAYCQNEGVCVDHWESSSCKCKPPFLKPNCAYFLPKTTFGHLDQPSIVHLSTSETENHLL
RNQIELSFLMRSGKPDAVLFYIGEKHAADVLTNYLVVKIAGGLISVRYRTGGRREIEFNS
KNRVDDNREHHVQIFVDRNRRQIIIDDLTEASEPITSRMSQEFYVDDIVIGASNVVASDS
EFYKGYLQDIQINHKSVIIHPTSLAIEKIGKLEKTQNVIEGAVSDPMCTSNACKHGECTE
TFNDFTCQCSDGSTGKHCDKVDYCREAKCVEGSKCENAENGHYCVFPITISNGSKLTYSF
DTKSSLSLTNLKFSLRSHSHNGHIFTLTVGTTTLSAYIFKKRFALVNNANQKFDSVIADG
KWHTIELLPFKVTVDGKSYISTTQLFPSESKSEASLFIGEQGQDVVFACLDNFQIGNYPK
LSFTKTVIPTTSETWSLTDKTSVGTGCISTEQCGLFSTCLNGGTCNDIWNKRKCTCPAGF
TGENCEENVNDCKYMDCGKNGYCLDGIDGSSCVCNNGFTGDHCEHATDECEGTDCHNGGR
CVKEGEKVTCKCDGSWMGDHCNVTFTTSCKDSPCQNFGQCMQKTDTAFECNCMDGYSGEL
CEQRDVNECNHYDCYRGHCVMTVSGPACQCELGYTGRFCEKLLNHCSSNTCSTRGTCHPV
WNNTICNCDNNWRGPHCQYPSNACLDFPCNNDGVCRTSEENTFTCECQKFFMGTRCEIEG
SCLKADCVHGECIQLSPEKHTCSCNIGYEGDACDKRIDYCKAGPCLNEASCENKLTGYKC
TCAVGFEGADCEVNIDECAFGHCKNGAKCRDKINDYDCICDGTGYEGRNCTIDINECENP
NNCINGECSNTLGGYKCACKNGFIGPRCSLRNPCTAQIASNNISSVTCVHGKCVNPVVHI
EKNREVAKYECACDRGYTGPTCSQRIKESAMSNISYLFGPIIAVVIVFAILGCLLLFFVI
RGNNAMHGHYSPSSHEFTQNRMAMPTVIKLPPQERLI
Download sequence
Identical sequences G0MIF2
CBN13559 135651.CBN13559

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.