SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 13616.ENSMODP00000027842 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  13616.ENSMODP00000027842
Domain Number 1 Region: 38-128
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.58e-36
Family SCAN domain 0.0000767
Further Details:      
 
Domain Number 2 Region: 628-685
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.8e-26
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 
Domain Number 3 Region: 460-517
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2e-25
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 4 Region: 572-629
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.08e-24
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 5 Region: 516-573
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.52e-23
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 6 Region: 404-461
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.29e-23
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 7 Region: 670-722
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.77e-21
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 8 Region: 349-405
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.45e-19
Family Classic zinc finger, C2H2 0.0078
Further Details:      
 
Domain Number 9 Region: 768-824
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.59e-16
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 10 Region: 853-903
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000513
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 11 Region: 209-268
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000000000000719
Family KRAB domain (Kruppel-associated box) 0.0033
Further Details:      
 
Domain Number 12 Region: 941-974
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000115
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 13 Region: 712-766
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000124
Family Classic zinc finger, C2H2 0.0092
Further Details:      
 
Domain Number 14 Region: 813-847
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000367
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Weak hits

Sequence:  13616.ENSMODP00000027842
Domain Number - Region: 918-952
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00424
Family Classic zinc finger, C2H2 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 13616.ENSMODP00000027842
Sequence length 974
Comment (Monodelphis domestica)
Sequence
MTGEVRKAICLAPQLLGAQEKRDNAWGPGSSLQQDSQLSCEVFRQHFRQLCYHETSGPQE
ALGQLRDLCGRWLRPDMNTKMQILELLVLEQFITILPGEIRAWVQLHRPESGEEAVAMVE
DFQKQLDGSGQKVRKLVKCQVSEYIDSKMEGQGLKNIYIGCKQKAYCKPDSTIDFVQYSL
PDTKDSVYLPTHSGICQESSCQTNIKHLLFQDLVTFEGVSADFTEKEWKGSAPAQRAFFR
DLMLENYRDVVSLEGDNVTENEENTSKQEIFVESELHNNSSENLQKDLCQGTEGGEACEM
ENMLEQQQGTLSQEKIKRIDSDFMEVIVQNKKIPVEERDEKHKEFWKSFDLITNTVTHEK
VPRGQKSYQCNECGKYFNRSSHLIGHQRIHTGEKPYECNECGKSFRQTSQLIVHLRIHTG
EKPYECNECGKAYRHSSHLIHHQRLHNGEKPYKCNECVKAFTQSSQLIDHQRIHTGEKPY
ECNMCGEAFSRSKSLIRHQILHTGEKPYKCNECGKAFCSNRNLIDHQRTHTGEKPYQCNE
CGKAFSRSKCLIRHQSLHTGEKPYKCSECGKTFSQGSQLIDHERIHTGEKPFACSECGKA
FSLSKSLIRHQRLHTGERPYKCNDCGKSFNQNSHLIIHQRIHTGEKPYECNECGKVFSYS
SSLLVHKRTHTGEKPYECHECGKAFSDSSQLIVHQRIHTGEKPYECKECGKAFSQRSTFN
HHQRIHSGEKHSALAEDYEKIFKYRSVLNCHQRIHTGEKPHKCKEYKAFATKSNLVDHQR
IHTGGDPYNNECGKSFILKKSFIGHQRLHKKEKLYKCNGCGKVFSKNLVLIHHQIHTGEK
PSECNEWKSLQMKKSFMRHQRLHNRERSYKCNECGKTFKRSSILTGHQKIHTGKKFKYNE
CDKTQTQFRSYFHQRICTREKPCECNVSQGSLSVIFFNIGHQRIHTATKPYECIQCGKAF
RYSQNLTAHQKIHT
Download sequence
Identical sequences 13616.ENSMODP00000027842

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]