SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 164328.JGI77559 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  164328.JGI77559
Domain Number 1 Region: 312-398
Classification Level Classification E-value
Superfamily PH domain-like 0.00000114
Family Pleckstrin-homology domain (PH domain) 0.045
Further Details:      
 
Weak hits

Sequence:  164328.JGI77559
Domain Number - Region: 123-217
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 0.00327
Family Synaptotagmin-like (S variant) 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI77559
Sequence length 402
Comment (Phytophthora ramorum)
Sequence
MPSSVRAPRRASEEDAASTQPCTPPLPDAKQQEPEQEQEFEQDAHMPGTPPMDAQSRRFW
GEKPLPPNPKETEARRLQEQEKLQPEERRALRHRAARVTQRLVRCFLARCQLSRRLSAVG
RPVELQITRVQGLEMLCDFRNVVSVLCNVRVLKKPFGPFMFHFSTGKSSNVNLPTWDDTF
LVPMLSSKCDIVTTLIGVTTTGRMRFLGQAIVALEPGWEHHKTASAPLGKWKFPVEESIV
GLHRFVQGTVEMEITPISSRMPCKSGQFLLAPPISTRPRRSFSFWSRQVSSNGMLASPAP
LTPRTPASASPGRKTVVTRWGVLTDTTFHLFDNTTAKLLISLDLAKLQVIKSNAQPKSDP
SRLFPVKLYAKGTMYVLYVSSYALQQSWEYKINLHRRQLLIP
Download sequence
Identical sequences H3GM68
164328.JGI77559 jgi|Phyra1_1|77559|fgenesh1_pg.C_scaffold_25000080

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]