SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 39947.LOC_Os09g23650.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  39947.LOC_Os09g23650.1
Domain Number 1 Region: 825-958
Classification Level Classification E-value
Superfamily Thioredoxin-like 5.86e-30
Family Thioltransferase 0.00034
Further Details:      
 
Domain Number 2 Region: 706-795
Classification Level Classification E-value
Superfamily TPR-like 3.04e-22
Family Tetratricopeptide repeat (TPR) 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 39947.LOC_Os09g23650.1
Sequence length 961
Comment (Oryza sativa)
Sequence
MERDFLGAIGKDEEQRRHAEERKESDYFGAGGGAAAAAMDWSFASRAALMSFRSSSSAAA
AAAREETRELAFPHFSALDGAKMQQASHVLARQKSFGAESHGIPQYAAAAAVHGAHRGQP
PHVLNGARVIPASSPFNPNNPMFRVQSSPNLPNAVGAGGGAFKQPPFAMGNAVAGSTVGV
YGTRDMPKAKAAQLTIFYAGSVNVFNNVSPEKAQELMFLASRGSLPSAPTTVARMPEAHV
FPPAKVTVPEVSPTKPMMLQKPQLVSSPVPAISKPISVVSQATSLPRSASSSNVDSNVTK
SSGPLVVPPTSLPPPAQPETLATTTAAAIMPRAVPQARKASLARFLEKRKERVTTVAPYP
LAKSPLESSDTMGSANDNNDWVLLTRVAFTALTAGVRLQDKAGAVAREVGGATVARAAAR
EAGEAAAESPRESRSSEEVVATAAGAAAGGQSGGGEPPGVEVVGGGRGRAEQRRPWGLVR
GRRSGGGLGEQRVGAGVEAALGTGAGAEADLGRGHRRGDLGGRRVGAGVAASLLSGNAPC
CLAPKPDDASISQSDMIIGFASRNKTELLCFSLHEDDGLVELLWCNGHVIMQSQAPWKPP
RPERTATTAAKAVDMATAGASSFEDEIMESDIELEGEAVEPDNDPPQKMGDPSVEVSDEK
RDQAQLCKNKGVDAFSEGKVYLPVLIEISHYNKMNCVILCNKHFSISGKLDEAIEHLTEA
IVLNPTSAIAYATRAVIFVKSKKPNAAIRDADAALKINPDSAKGYKSRGMAKAMLGKWEE
AAQDLRMAAKLDYDEEIGAELKKVEPNVLKIEEHRKKYERLRKERDIKKAEMEKQRKHAE
EVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLA
EKHRNVVFLKVDIDELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQHGS
S
Download sequence
Identical sequences 39947.LOC_Os09g23650.1 LOC_Os09g23650.1|13109.m02237|protein LOC_Os09g23650.1|PACid:21927298

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]