SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 6239.C07A12.3a.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  6239.C07A12.3a.1
Domain Number 1 Region: 143-438
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.7e-43
Family Nuclear receptor ligand-binding domain 0.0000513
Further Details:      
 
Domain Number 2 Region: 75-158
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.57e-28
Family Nuclear receptor 0.00032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 6239.C07A12.3a.1
Sequence length 542
Comment (Caenorhabditis elegans)
Sequence
MGNKIHAGFTFTPSHARSLDCFVCLLVLFSFRSTPPHGRHPAIEPTLLISHYYRGQMLGT
YNGDSKAETDGKDNSICHICSDVATGRHYGAIACNGCKGFFRRTVRRNYEYHCRFESKCE
IDKHNRAVCRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMKTYCQDPTPRTSPELTM
SPVEDEYDQLLESLLKSEMTIQSLRDTVITQTGNVEYTTKSKNRLSHTDRTATLNDVLKS
MHSQLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGANDALKLLNDLY
IPRASKTTPHLKEYVDGFYLRDCEKVMDQLVEPMRFLKLDNKEFVALKACVLFNPVAPGL
SNHAVNLVLNARRKIFAAFEKYVRVNKPLETTRVGDLTFFILTPLSVLSKSISEDIMFTK
VSGVARIDVLMEELILAETDYGEDRQDQTPCSIMNDTPSGSQDMCSPCPEDLLRTSTSSN
SPTNSSLTAGLLLKTDDAMMSGIGTQYTTPQPHTPQFADSSHLNLPYAPFTSSYNQYPNT
YS
Download sequence
Identical sequences Q17771
C07A12.3a C07A12.3a 6239.C07A12.3a.1 C07A12.3a NP_001024365.1.50509

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]