SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 6239.F41B5.10 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  6239.F41B5.10
Domain Number 1 Region: 168-393
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.89e-33
Family Nuclear receptor ligand-binding domain 0.0083
Further Details:      
 
Domain Number 2 Region: 2-94
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.26e-26
Family Nuclear receptor 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 6239.F41B5.10
Sequence length 394
Comment (Caenorhabditis elegans)
Sequence
MFKCQICEQPAHGQHFGVVSCRACAAFYRRATLNPKKKILPNCIHEDGKKMDENGVFSCR
RCRLKKCLKKGMDASKFQLERDLISSSLSMAEIPQTLSTFLGRPNFLLFCNPLEPSTTAK
TVVDFSCLLERANELLKNGRWNPYNSEISSLEKMAMRYENMQIIKSSRLRHLSRMGKDET
ILIWEQKILNTTDWLTNFNEFNVLPLDVQLKIVKTIWQVYGRFEKIAKTAELRRKKLIEH
DNVFMVGDEACLNSKNVEMDVSWYTDYSFEQIAYFMDCFHDDIYLQIVKEFETLNPTPIE
LNFMLLQVCLHHAGKKLHGDMLELTDYLQEVISNQLHNHYLNVRKMPNYSARLARMMKVN
NLMRTDLRRQSEKVQLAMAFDVFKLELSHPEVMC
Download sequence
Identical sequences O16677
F41B5.10 F41B5.10 6239.F41B5.10 F41B5.10 NP_503621.1.50509 F41B5.10

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]