SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 9598.ENSPTRP00000025543 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  9598.ENSPTRP00000025543
Domain Number 1 Region: 50-139
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.62e-35
Family SCAN domain 0.00011
Further Details:      
 
Domain Number 2 Region: 228-289
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.19e-22
Family KRAB domain (Kruppel-associated box) 0.0013
Further Details:      
 
Domain Number 3 Region: 493-550
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.02e-20
Family Classic zinc finger, C2H2 0.0093
Further Details:      
 
Domain Number 4 Region: 812-864
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.7e-16
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 5 Region: 698-750
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.18e-16
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 6 Region: 668-713
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000597
Family Classic zinc finger, C2H2 0.009
Further Details:      
 
Domain Number 7 Region: 539-563,592-618
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000535
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Domain Number 8 Region: 444-494
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000272
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Domain Number 9 Region: 605-645
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000212
Family Classic zinc finger, C2H2 0.027
Further Details:      
 
Weak hits

Sequence:  9598.ENSPTRP00000025543
Domain Number - Region: 789-823
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0381
Family Classic zinc finger, C2H2 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 9598.ENSPTRP00000025543
Sequence length 867
Comment (Pan troglodytes)
Sequence
MPPGRWHAAYPAQSQSSRERGRLQTVKKEEEDESYTPVQAARPQTLNRPGQELFRQLFRQ
LRYHESSGPLETLSRLRELCRWWLRPDVLSKAQILELLVLEQFLSILPGELRVWVQLHNP
ESGEEAVALLEELQRDLDGTSWRDPGPAQSPDVHWMGTGALRSAQIWSLASPLRSSSALG
DHLEPPYEIEARDFLAGQSDTPAAQMPALFPREGCPGDQVTPTRSLTAQLQETMTFKDVE
VTFSQDEWGWLDSAQRNLYRDVMLENYRNMASLVGPFTKPALISWLEAREPWGLNIQAAQ
PKGNPVAAPTGDDLQSKTNKFILNQEPLEEAETLAVSSGCPATSVSEGIGLRESFQQKSR
QKDQCENPIQVRVKKEETNFSHRTGKDSEVSGSNSLDLKHVTYLRVSGRKESLKHGCGKH
FRMSSHHYDYKKYGKGLRHMIGGFSLHQRIHSGLKGNKKDVCGKDFSLSSHHQRGQSLHT
VGVSFKCSDCGRTFSHSSHLAYHQRLHTQEKAFKCRVCGKAFRWSSNCARHEKIHTGVKP
YKCDLCEKAFRRLSAYRLHRETHAKKKFLELNQYRAALTYSSGFDHHLGDQSGEKLFDCS
QCRKSFHCKSYVLEHQRIPPLEKPYCTKCRKTFRMGSNFTRHMRLRFRQSPDCRPPHVAP
AVEKTFPKISTGEKRFGCQECGKTFTRKRTLLDHKGIHSGEKRYKCNLCGKSYDRNYRLV
NHQRIHSTERPFKCQWCGKEFIGRHTLSSHQRKHTRAAQAERSPPARSSSQDTKLRLQKL
KPSEEMPLEDCKEACSQSSRLTGLQDISIGKKCHKCSICGKTFNKSSQLITHKRFHTRER
PFKCSKCGKTFRWSSNLARHMKNHIRD
Download sequence
Identical sequences 9598.ENSPTRP00000025543

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]